Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101048711
Help
Entry
101048711 CDS
T04350
Symbol
TRPM1
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1 isoform X1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbq04040
]
101048711 (TRPM1)
Ion channels [BR:
sbq04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101048711 (TRPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
LSDAT_prok
EBNA2_Core
RraB
Motif
Other DBs
NCBI-GeneID:
101048711
NCBI-ProteinID:
XP_003940603
UniProt:
A0A2K6SSZ4
LinkDB
All DBs
Position
Unknown
AA seq
1642 aa
AA seq
DB search
MSSFKRGSLKSSTSGSQKGQKCWIEKTFCKRECIFVIPSPKDPNRCCCGQFTNQHIPPLP
SATPSKNEEENQQVEAQPEKWSVAKHTQSYPTDSYGVLEFQGGGYSNKAMYIRVSYDTKP
DSLLHLMVKDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTTGAWIFTGGVS
TGVISHVGDALKDHSSKSRGRVCAIGIAPWGIVENKEDLVGKDVTRVYQTMSNPLSKLSV
LNNSHTHFILADNGTLGKYGAEVKLRRLLEKHISLQKINTRLGQGVPLVGLVVEGGPNVA
SIVLEYLREDPPVPVVICDGSGRASDILSFAHKYCEEGGIINESLREQLLVTIQKTFNYN
KTQSHQLFAIIMECMKKKELVTVFRMGSEGQQDIEMAILTALLKGTNVSAPDQLSLALAW
NRVDIARSQIFVFGPHWPPLGSLAPPADSKATEKEKKPPTATTKGGRGKGKGKKKGKVKE
EVEEETDPRKLELLNWVNALEQAMLDALVLDRVDFVKLLIENGVNMQHFLTIPRLEELYN
TRLGPPNTLHLLVRDVKKSNLPPDYHISLIDIGLVLEYLMGGAYRCNYTRKSFRTLYNNL
FGPKRPKALKLLGMEDDEPPAKGKKKKKKKKEEEIDIDVDDPAVSRFQYPFHELMVWAVL
MKRQKMAVFLWQRGEESMAKALVACKLYKAMAHESSESDLVDDISQDLDNNSKDFGQLAL
ELLDQSYKHDEQIAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMWMGRL
RMRKNPGLKVIMGILLPPTILFLEFRTYDDFSYQTSKENEDGKEKEEENMDANADAGSRK
GDEENEHQKQKSIPIGTKICEFYNAPIVKFWFYTISYLGYLLLFNYVILVRMDGWPSLQE
WIVISYIVSLALEKIREILMSEPGKLSQKIKVWLQEYWNITDLVAISTFMIGAILRLQNQ
PYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLVVLMSFG
VARQAILHPEEKPSWKLARNIFYMPYWMIYGEVFADQIDLYAMEINPPCGENLYDEEGKR
LPPCIPGAWLTPALMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTF
HDRPVLPPPMIILSHIYIIVMRLSARCRKKREGDQEERDRGLKLFLSDEELKRLHEFEEQ
CVQEHFREKEDEQQSSSDERIRVTCERVENMSMRLEEINERETFMKTSLQTVDLRLAQLE
ELSNRMVNALENLVGIDRSDLIQARSRASSECEATYLLRQSSINSADGYSLYRYHFNGEE
LLFEDTSLSMSPGTGVRKKTCSFRIKEEKDAKTRLVPERQNSLHLSPGTSTSATPDGSHL
AVDDLKNAEESKLGPDTWISKEDDERQADSKKEETIAPSLNKTDVIPGQDKSDVQNTQLT
VETTNTEGTVPYPLEETKITRYYPDETFNTFKTMKSRSVMYSRGRKLVSGVKQDVEYSSI
MDQQWTTEWKCQVQKITRSHSTDIPYIVSEAAVQAEHKQQCADMEGEHCVAEAIPRIPRL
SLTITDRNGIENLLSVKPDQTLGFPSLRSKSLHGHPRNAKSIQGKLDRSGHASSVSSLVI
VSGITAEEEKVKKEKASTETEC
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgagctccttcaagaggggctcactcaagagctccacatcggggtcccagaagggtcag
aaatgctggatagagaaaaccttttgcaaacgggaatgcatctttgtaattcctagcccg
aaagaccctaacaggtgttgctgtggccagttcaccaaccagcatatcccccctctgccg
agtgcaacacccagcaaaaatgaagaggaaaaccagcaggtggaggctcagcctgagaaa
tggtctgtcgccaagcacacccagagctacccaacagattcctatggagttcttgaattc
cagggtggtggatactccaataaagccatgtatatccgtgtgtcctatgacaccaagcca
gactcgctgctgcatctcatggtgaaagactggcagctggaactccccaagctcttaata
tctgtgcatggaggcctccagaactttgagatgcagcccaagctgaagcaagtctttggg
aaaggcctgatcaaggctgccatgaccacgggggcctggatcttcaccgggggcgtcagc
acaggtgtcatcagccacgtgggggatgccttgaaagaccactcctccaagtccagaggc
cgagtttgtgctataggaattgctccatggggcatcgtggagaataaggaagacctggta
gggaaggatgtaacaagagtgtaccagaccatgtccaaccctctaagtaagctctctgtg
ctcaacaactcccacacccacttcatcctggctgacaatggcaccctgggcaagtatggt
gccgaagtgaagctgcgaaggctgctggaaaagcatatctccctgcagaagatcaacaca
agactggggcagggcgtgcccctcgtgggcctcgtggtggaggggggccctaacgtggcg
tccatcgtcttggaatacctgcgagaagaccctcccgtccccgtggtgatttgcgatggc
agcggccgcgcctcggacatcctgtcctttgcgcacaagtactgtgaagaaggcgggata
ataaatgagtccctcagggagcagcttctagttaccattcagaaaacatttaattacaat
aagacacaatcgcatcagctgtttgcaattataatggagtgcatgaagaaaaaagaactc
gtcactgtattcagaatgggttctgagggccagcaggacatcgagatggcaattttaact
gccctgctgaaaggaacaaatgtatctgctccagatcagctgagcttggcactggcttgg
aaccgcgtggacatagcacgaagccagatctttgtctttgggccccactggccgcccctg
ggaagcctggccccgccagcggacagcaaagccacagagaaggagaagaagccacccacg
gcaaccaccaagggaggaagaggaaaaggcaaaggcaagaagaaagggaaagtgaaagag
gaagtggaggaagaaactgatccccggaagttagagctgctgaactgggtgaatgctttg
gagcaagcgatgctggatgccttagtcttagatcgggtcgactttgtgaagctcctgatt
gaaaacggagtgaacatgcaacactttctgaccattccgaggctggaagagctttataac
acaagactgggtccaccaaacacacttcatctgctggtgagggatgtgaaaaagagcaac
cttccacccgattaccacatcagcctcatagacatcgggcttgtgctggagtacctcatg
ggaggagcctaccgctgcaactacactcggaagagctttcgcaccctttacaacaacttg
ttcggacccaagaggcctaaagctcttaaactcctgggaatggaagatgatgagcctcca
gctaaagggaagaaaaagaaaaagaagaaaaaggaggaagagatcgacatcgatgtggac
gaccccgctgtgagtcggttccagtaccccttccacgagctgatggtgtgggccgtgctg
atgaaacgccagaaaatggcggtgttcctctggcagcgaggggaggagagcatggccaag
gccctggtggcctgcaagctctacaaggccatggcccacgagtcctccgagagcgatctg
gtggatgacatctcccaggacttggacaacaattccaaagacttcggccagcttgctttg
gagttattagaccagtcctataagcacgatgagcagattgccatgaaactcctgacctat
gagctgaaaaactggagcaactcgacctgcctcaaactggccgtggcagccaaacaccgg
gacttcattgctcacacctgcagccagatgcttctgaccgacatgtggatgggaaggctg
cggatgcggaagaaccctggcctgaaggttatcatggggattcttcttccccctaccatc
ttgtttttggaatttcgcacatacgatgatttctcgtatcaaacatccaaggaaaatgaa
gatggcaaagaaaaagaagaggagaatatggatgcaaacgcagatgctggctcaagaaag
ggggatgaggagaatgagcaccaaaaacagaaaagtattcccatcgggacaaagatatgt
gaattctataacgcgcccattgtcaagttctggttttacacgatatcgtacttggggtac
ctgctgctgtttaactatgttatcctggtgcggatggacggctggccctccctccaggag
tggatcgtcatctcctacattgtgagcctggcgttggagaagatacgagagatcctcatg
tcagaaccaggcaaactcagtcagaaaatcaaagtttggcttcaggagtactggaacatc
acggatctcgtggccatttccactttcatgattggagcaattcttcgcctgcagaaccag
ccctatatgggctacggccgcgtgatctactgtgtggatatcatcttctggtacatccgc
gtcctggacatctttggtgtcaacaagtatctggggccgtatgtgatgatgattggaaag
atgatgatcgacatgctgtactttgtggtcatcatgctggttgtgctcatgagtttcgga
gtagcccgtcaagccattctgcacccggaggagaagccttcttggaaactggcccgaaac
atcttctacatgccctactggatgatctatggagaggtgtttgcagaccagatagacctc
tacgccatggaaattaatcctccttgtggtgagaacctatacgatgaggagggcaagcgg
cttcctccctgtatccctggtgcctggctcacaccagcactcatggcatgttacctacta
gtggccaacatcttgctggtgaatctgctgattgctgtgttcaacaatacgttctttgaa
gtaaaatcaatatccaaccaggtgtggaagttccagcgatatcagcttattatgacattt
catgacaggcctgtcctgccgccaccgatgatcattttaagccacatctatatcattgtt
atgcgtctcagtgcccgctgcaggaagaagagagaaggggaccaagaggaacgggatcgt
ggattgaagctgttcctcagcgatgaggagctgaagaggctgcacgagttcgaggagcag
tgcgtgcaggagcacttccgcgagaaggaggacgagcagcagtcgtccagcgacgagcgc
atccgcgtcacttgtgagagagttgaaaatatgtcaatgaggttggaagaaatcaatgaa
agagaaacttttatgaaaacttccctgcagactgttgaccttcgacttgctcagctagaa
gaattatctaacagaatggtgaatgctcttgaaaatcttgtgggaatcgacaggtctgac
ctgatccaggcacggtcccgggcttcttctgaatgtgaggcgacatatcttctgcggcaa
agcagcatcaatagcgctgatggttacagcttgtatcgatatcattttaacggagaagag
ttattgtttgaggatacttctctctccatgtcaccagggacaggagtcaggaaaaaaacc
tgttccttccgtataaaggaagagaaggatgcaaaaacacgtttagtcccagaacgtcag
aacagccttcacctttcaccaggcaccagcacatcagcaaccccagatggcagtcacctt
gctgtagatgacttaaagaatgctgaagagtcaaaattaggtccagatacttggatctca
aaggaagatgatgaacgacaggcagactctaaaaaagaagaaactattgccccaagttta
aataaaacagatgtgatacctggccaggacaaatcagatgttcaaaacactcagctaaca
gtggaaacgacaaatacagaaggcactgttccctatcccctggaagaaaccaaaattaca
cgctattaccctgatgaaacgttcaatacttttaaaacaatgaagtccagaagtgtcatg
tattcccggggaagaaagctggtcagtggggttaaacaggatgtagagtacagctcaatc
atggaccagcaatggacgacggaatggaaatgccaagttcagaagatcacacgctctcat
agcacagatattccttacattgtgtcagaagctgcagtgcaagctgagcataaacagcag
tgtgcagatatggaaggtgaacactgtgtcgctgaagcaattcctcgaatccctcgctta
tccctaaccattactgacagaaatgggatagaaaacttactgtctgtgaaaccagatcaa
actttgggattcccatctctcaggtcaaaaagtttacatggacatcctaggaatgcaaaa
tccattcagggaaagttagacagatctggacatgccagtagcgtaagtagcttagtaatt
gtgtctggaattacagcggaagaagaaaaggttaagaaagagaaagcttccacagaaact
gaatgctag
DBGET
integrated database retrieval system
