Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101048733
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Entry
101048733 CDS
T04350
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101048733 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbq03019
]
101048733 (CNOT1)
Messenger RNA biogenesis [BR:
sbq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101048733 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101048733 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
101048733
NCBI-ProteinID:
XP_010329690
LinkDB
All DBs
Position
Unknown
AA seq
2297 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECALLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCSSIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWQAPVLFTSNFVEYIWQGQSPSIRQLIMHAMAE
WYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKWLTDK
IREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAGSVSQ
ELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMTSLSIGG
SAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGGLGTG
SLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHFSKEI
DDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYRFFPQ
YPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDRFKNR
LKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQAQAQA
QVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLVATDQ
TERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIEPN
FHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITL
AKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTMAIMN
VLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPKKDVK
QPEELPPITTTTTSTTPATNTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTIPLFQ
AHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIAAHHM
MRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNCELAC
CFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKVGGV
DPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELEQHLH
AIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADLLLRY
RECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQYDL
HLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRGNAPE
GLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVNLYH
SAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHNPAAN
PTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSE
FQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLELISH
RIFIARMLAHTPQQKVWLQFISCVAASTQLWATCGTLRVLLVLLHDFPEFLCDYHYGFCD
VIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRILTNFTGVMPPQFKKD
LDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQLINALVLYVGTQAIAHIHNKGSTPSM
STITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEA
IQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQC
CMGQKQAQQVMEGTGAS
NT seq
6894 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaattaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcagtttctgattcaggagtgtgcattg
ctgattacaaagccaaattttatctcgacgctgtcctatgccattgataatccactgcac
tatcagaagagtttaaagcctgcaccccatttatttgcccagctgagtaaagtgctcaaa
ttaagcaaagtacaagaggtaatttttggccttgccctgttgaattcttccagctcagat
cttagaggtttcgctgcccagtttatcaaacagaagcttccagatcttttgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ttacacctcctcctctcccatctcctctttgggcagaagggagcctttggagttggacaa
gaacagatagacgcttttcttaagacgttgcgcagagattttccccaagaacgctgtccc
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattccggaggggtagctaaaaccatgatggagagctctttggctgatttcatgcaa
gaagtaggctatggcttttgttcaagtattgaagagtgtcgcaatataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggcattccattacagagtatttctgctccgggtagtgggatc
tggagtgatggaaaagataaaagtgatggagcacaggcacacacgtggaatgtggaagtc
ttgattgatgttcttaaagaattgaatccgagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcaaaggggtttgggtatggaagtcttcccagtagacctcatatacagaccttggaaa
catgctgaaggccagctctccttcattcaacattcccttataaatccagagatcttctgt
tttgctgactatccctgtcatactgttgccactgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggcaagcccctgtgcttttcacctctaattttgtagaa
tatatttggcaaggacagtctccctcgattcgccaactcatcatgcatgcaatggcagaa
tggtacatgagaggggagcagtatgatcaggccaaattgtctcgaatacttgatgtggcc
caggacttgaaggccttgtcaatgctgctaaatggtactccatttgcctttgttattgac
cttgctgcacttgcttcacgtcgtgaatacctcaaacttgataagtggctcacagataaa
attcgagagcatggggagccttttatccaggcatgtatgactttcttaaagagacgatgt
ccttctattttgggtggacttgccccagaaaaagaccagcccaaaagtgctcaacttcct
ccagaaactctggcgacaatgttggcctgtttgcaagcttgtgcagggagtgtttctcag
gagttatcggaaactatccttaccatggtagccaattgcagtaatgttatgaataaggcc
agacaaccaccacctggagttatgccaaaaggacgtcctcctagtgctagcagcttagat
gccatttctcctgttcagattgaccctcttgctggaatgacatctcttagtataggtggt
tcagctgcccctcacacccagagtatgcagggttttcctccaaatttgggttctgcattc
agtacccctcagtcaccagcaaaagcatttccacccctttcaacccccaatcagaccact
gcattcagtggtattggaggactttcatcacagcttccagtaggtggtcttggcacaggc
agcctgactggtataggaactggtgctcttggactccctgcagtgaataacgaccctttt
gtacagagaaaactgggcacctctggattgaaccagcctacattccagcagagtaagatg
aaaccttcggacttgtctcaggtgtggccagaagcaaaccagcactttagtaaagagata
gatgatgaagcaaacagctatttccagcgaatatataatcatccaccacatccaaccatg
tctgttgatgaggtattagaaatgctgcagagatttaaagactctactataaagagagaa
cgagaagtatttaactgtatgctaaggaacttgtttgaagaatatcggttttttccccag
tatcctgataaagagttacatataacagcctgcctgtttggtggtataattgaaaaagga
ctagttacttacatggcactaggtctggccctacgatatgttcttgaagccttacgcaag
ccttttggatccaaaatgtattatttcgggattgctgcactagatagatttaaaaacaga
ttgaaggactatccccagtattgtcagcacttggcttctatcagtcactttatgcaattt
ccacatcatttacaggagtatatcgagtatggacagcagtcgagagatcctcctgtgaaa
atgcaaggctctatcacaacccctggaagtattgcactggcgcaggcccaggctcaggcc
caggttccagcaaaagctcctcttgctggtcaggttagcactatggtaaccacctcaaca
accaccactgttgctaaaaccgttacggtcaccaggccaactggagtcagctttaagaaa
gatgtgccaccttctattaatactacaaatatagatacgttgcttgtggccacagatcaa
actgagagaattgtggagcccccggaaaatatccaggagaaaattgcctttatttttaat
aatctctcacagtcaaatatgacacaaaaggttgaagagctaaaggaaactgtgaaagaa
gaatttatgccatgggtttcacagtatctggttatgaagagagtcagtattgagccaaac
tttcatagcctgtattcaaacttccttgacacactgaagaatcccgaatttaacaagatg
gttctgaatgagacctatagaaacattaaagtgctcctgacctctgataaagctgcagcc
aatttctcagatcgttctttgctgaagaacttgggacattggctaggaatgatcacatta
gctaaaaataaacccatcttacacactgacttggatgtgaaatcattgctgctagaggct
tacgttaaaggacaacaagaattgctctatgtagtgccctttgttgccaaagttttagag
tctagcattcgtagtgtggtttttaggccaccaaacccttggacaatggcaattatgaat
gtattagctgagctacatcaggagcatgacttaaagttaaacttgaaatttgaaattgag
gtcctctgcaaaaaccttgcattagacatcaatgagctaaagcctggaaacctcctaaag
gataaagatcgcctgaagaatttagatgagcaactttctgctccaaagaaagatgtcaag
cagccagaagaactccctcctatcacaaccacaacaacttctactacaccagctaccaac
accacttgtacagccacggttccaccacagccacagtacagttaccatgacatcaatgtc
tattcccttgccggcctggcaccccacattactctaaatccaacaattcccttgtttcag
gctcatccacagttgaagcagtgtgtgcgtcaggcaattgaacgggctgtccaggaattg
gtccatcctgtggtggatcgatcaattaagattgccatgactacttgtgagcaaatagtc
aggaaggattttgctctggattcggaggaatctcgaatgcgaatagcagctcatcacatg
atgcgtaacttgacagctggaatggctatgattacatgcagagaacctttgctcatgagc
atatctaccaacctaaagaacagttttgcctcagcccttcgtactgcttccccacaacaa
agggagatgatggatcaggcagctgctcaattagctcaggacaattgtgagttggcttgc
tgttttattcagaagactgcagttgaaaaagcaggccctgagatggacaagagattagca
actgaatttgagctgagaaaacatgctaggcaagaaggacgcagatactgtgatcctgtt
gtcttaacttaccaagccgaacggatgccagagcaaatcaggctgaaagttggtggtgtg
gacccaaagcagctggctgtttatgaagagtttgcacgcaatgttcctggcttcttgcct
acaaatgacctaagtcagcccacaggatttttagctcagcccatgaagcaagcttgggca
acagatgatgtagctcagatttatgataagtgtattacagaactggagcagcatctgcat
gccatcccaccaactttggccatgaaccctcaagctcaggctcttcgaagtctcttggag
gttgtagttttatctcgaaactctcgggatgccatagctgctcttggattgctccaaaag
gctgtagagggcttactagatgccacaagtggtgctgatgctgacctgctgctgcgctac
agggaatgccacctcttggtactaaaagctctgcaggatggccgggcatatgggtctcca
tggtgcaacaaacagatcacaaggtgcctaattgaatgtcgggatgaatataaatataat
gtggaggctgtggagctgctaattcgcaatcatttggttaatatgcagcagtatgatctt
cacctagcacagtcaatggagaatggtttaaactacatggctgtggcatttgctatgcaa
ttggtgaaaatcctgctggtggatgaaaggagtgttgcccatgttaccgaggcagatctg
ttccacaccattgaaaccctcatgagaattaatgctcattccagaggcaatgctccagaa
ggattgccccagctgatggaagtagtgcgatccaactatgaagcaatgattgatcgtgct
catggaggcccaaactttatgatgcattctgggatctctcaagcctcagagtacgatgac
cctccgggcctgagggagaaggcagagtatcttctgagggaatgggtgaatctctaccat
tcagcagcagctggccgcgacagtaccaaagctttctctgcgtttgttggacagatgcac
cagcaaggaatactaaagactgatgatctcataacacggttctttcgtctgtgtactgaa
atgtgtgttgaaatcagttatcgtgctcaagctgagcagcagcacaatcctgctgctaat
cccactatgatccgagccaagtgctatcacaacctggatgcctttgttcgactcattgca
ctgctcgtgaaacactcaggggaggccaccaacactgtcacaaagattaatctgctgaac
aaggtccttggtatagtagtgggagttcttcttcaggatcatgatgttcgtcagagtgaa
tttcagcagcttccctaccatcgaatttttatcatgctgcttttggaactcaatgcacct
gagcatgtgttggaaaccattaattttcagacacttacagctttctgcaatacattccac
atcttgaggcctaccaaagctcctggctttgtatatgcctggcttgaactgatttcccat
cggatatttattgcaagaatgctggcacatacgccacagcagaaggtgtggctgcagttt
atctcctgtgttgctgcttcaactcagttgtgggccacctgtggcactttaagagtgctg
ctggttcttttgcatgatttcccagagttcctttgtgattaccattatgggttttgtgat
gtgattccacctaattgtatccagttaagaaatttgatcctgagtgcctttccaagaaac
atgaggctcccagacccgttcactcctaatctaaaggtggacatgctgagtgaaattaac
attgccccccggattctcaccaatttcactggagtaatgccacctcagttcaaaaaggat
ttggattcctatcttaaaactcgatcaccagtcacttttctgtctgatctgcgcagcaac
ctacaggtatccaatgaacctgggaatcgctacaacctccagctcatcaatgcactggtg
ctctatgtagggactcaggccattgcgcacatccacaacaagggcagcacgccttcaatg
agcaccatcactcattcagcacacatggatatcttccagaatttggctgtggacttggac
actgagggtcgctatctctttttgaacgcaattgcaaatcaactccggtacccaaatagc
cacactcactacttcagttgcaccatgctgtacctttttgcagaggccaatacggaagct
atccaagaacagatcacaagagttctcttggaacggttgattgtaaataggccacatcct
tggggtcttcttattaccttcattgagctgattaaaaacccagcgtttaaattctggaac
catgaatttgtacactgtgccccagaaatcgaaaagttattccagtcggtcgcacagtgc
tgcatgggacagaagcaggcccagcaagtaatggaagggacgggtgccagttag
DBGET
integrated database retrieval system
