Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101049282
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Entry
101049282 CDS
T04350
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04612
Antigen processing and presentation
sbq05145
Toxoplasmosis
sbq05152
Tuberculosis
sbq05164
Influenza A
sbq05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
101049282 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
101049282 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
101049282 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
101049282 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
101049282 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sbq01001
]
101049282 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sbq04054
]
101049282 (CIITA)
Enzymes [BR:
sbq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101049282 (CIITA)
Protein kinases [BR:
sbq01001
]
Serine/threonine kinases: Other
TAF1 family
101049282 (CIITA)
Pattern recognition receptors [BR:
sbq04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101049282 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
101049282
NCBI-ProteinID:
XP_010337670
LinkDB
All DBs
Position
Unknown
AA seq
1209 aa
AA seq
DB search
MNHFQAILSQVRTLLSSHRPSLVQALLDSLLTEELLSREYHCTLLHEPDSETLARKISLT
LLEKGDPDLVLQGWAWSGLQPPAAEKGPGHRDHGGSTQCATMELGPLEGSSYLELLNSNA
DPLHLYQLHDPMDLAGEEETELHSETDMDTINCDQFSRLWRDMEGDEETREAYASIAELD
QYVFQDSQLEDPNKDIFIEHIGPDEVSESMETPAEVGLKKSQKRPFPEELPADLKHWKPA
EPPTVVTGSFLMGPVSDSSTLPCLLPPALFNQEPASGQTHLEETYQTPMPSSSSSLSCLN
LPEGPVQFIPTLSTLPQGFWQISGAGTGGSSIFIYHSEVPQASQPPSPSGLTVHGLPTSP
DRPGSTSPFAPSATDLPSMPEPALTSRANVTEHKTSPTQCQAAGEGSNKLPKWPESVEQF
YRLLQDTYQTEPAGPDGILVEADLVRAKLVRSSSKSLERELATPDWAERQLAHGGLAGVL
LAARERRRPRETQVIAVLGKAGQGKSYWAGAVSRAWACGRLPQYDFVFSVPCHCLNRPGD
AYRLQDLLFSLGPRPLVADDEVFSHILKRPDRVLLILDAFEKLEAQDSFLHSTCGPAPSE
PCSLRGLLAGLFQRKLLRGCTLLLTTRPRGRLTQSLSKADALFELSGFSMEQAQAYVMRY
FECSGKTEQQARALALLRDRPFLLSHGHSPTLCQAVCQLSEALLELGGDAELPSTLTGLY
VGLLGPAARDGPPGALAELAKLAWELGRRHQSTLREDHFPSAGVRTWALAKGLVQHPPGA
TASELAFCSFLLQCFLAATWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGL
IFQPPTRCLGALVGPSAAALADRKQKVLAKYLKRLQPGTLRARQLLELLHCAHEAEEAGI
WRHVVQELPARLSFLGTRLTPPDAHVLGKALEAAGRDFSLDLRSTGIDPSGLGSLVGLSC
VTHFRAALSDTVALWESLRQRGETKLLQAAEEKFTIEPFKAKSLKDVEDLGKLVQTQRTR
SSSEDTAGELPAVRDLKKLEFALGPISGPRAFPKLVRILMAFSSLQHLDLDALSENKIGD
EGVSQLSATFPQLKSLETLNLSQNSITDVGACKLAEALPSLAASLLRLSLYNNCICDIGA
ESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASLRKCPHVETLAMWTPTIPFGVQEHLQ
QQDSRISLR
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccaggccatcctgagtcaggtgcgaacgctgctctccagccatcggccc
agcctggtgcaggccctcctggacagcctgctgacggaggagctcctctccagggaatac
cactgcaccctgctccatgagcctgatagcgagactttggccaggaagatctctttgacc
ctgctagaaaaaggagacccagacttggtcctccaggggtgggcctggagtgggctgcag
cccccagcagccgagaaaggccccggccacagggaccatggtggcagcacacagtgtgcc
accatggagttgggacccctagaaggcagcagctacctggaacttctcaacagcaatgct
gaccccctgcacctctaccagttacatgacccaatggacctggctggagaagaagagact
gagcttcactcagaaactgacatggacaccatcaactgtgaccagttcagccggctgtgg
cgtgacatggaaggggatgaagagaccagggaggcttatgccagcatcgcggaactggac
cagtatgtgttccaggactcccagctggaggacccaaacaaagacattttcatagagcac
ataggaccagatgaagtcagtgagagtatggagacgccggcagaagttgggctgaaaaaa
agtcagaaaagacccttcccagaggagcttcctgcagacctgaagcactggaagccagct
gagccccccactgtagtgactggcagttttctcatggggccagtaagtgactcctccacc
ctgccctgcctgctaccgcctgctctgttcaaccaggagccagcctccggccagactcac
ctggaagaaacctaccagacacccatgccttcctccagttcctcgctgagctgcctgaat
ctccccgagggacctgtccagttcatccccaccctctccactctgccccaggggttctgg
caaatctctggggctgggacaggaggctccagtatattcatctaccacagtgaggtgccc
caggccagtcaaccaccttctcccagtggactcactgtccacggcctcccgacatcccca
gaccggccaggctccaccagccccttcgctccatcagccactgacctgcccagcatgcct
gaacctgccctgacctcccgagcaaatgtgacagagcacaagacgtcccccacccagtgc
caggcagctggagagggctctaacaaacttccaaaatggcctgagtcagtggagcagttc
taccgcttgctgcaagacacatatcagactgaaccagcaggcccggatggcatcctggtg
gaggcggatctggtgcgtgccaagctggtgaggagcagcagcaagagcctggagcgggaa
cttgccacgccagactgggcagagcggcagctggcccacggaggcctggctggggtgctg
ctggctgccagggagcgccggcggccgcgtgagacacaagtgattgccgtgctgggcaaa
gctggtcagggcaagagctattgggctggggcagtgagccgtgcctgggcttgtggccgg
cttccccagtacgacttcgtcttctctgtcccctgccactgtttgaaccgtcccggcgat
gcctaccgcctgcaggatctgctcttctccctgggtccacggccactcgtggcagacgac
gaggtcttcagccacatcttgaagaggcctgaccgcgtgctgctcatcctagacgccttc
gagaagctggaagctcaagacagcttcctgcacagcacgtgcggaccggcgccctcagag
ccctgctccctgcgagggctgctggctggccttttccagaggaagctgctccgaggctgc
accctcctcctcaccacccggccccggggccgcctgacccagagcctgagcaaggccgat
gccctgtttgagctctccggcttctccatggagcaggcccaggcctatgtgatgcgctac
tttgagtgttcggggaagaccgagcagcaagccagagccctggcactcctccgggaccgg
ccatttctcctcagtcatggccacagccctactttgtgccaggcagtgtgccagctctca
gaggcactgctggagctgggtggggacgccgagctgccctccacgctcacgggactctat
gtcggcctgctgggccctgcagcccgcgacggtcccccgggggccctggcagagctggcc
aagctggcctgggagctgggccgcagacaccaaagcaccctacgggaggaccacttccca
tccgcaggcgtgaggacctgggcactggccaaaggcttagtgcagcacccgccgggggcc
acagcgtctgagctggccttctgcagcttcctcctgcagtgcttcctggcggccacgtgg
ctggctctgagcggcgaaatcaaggacaaggagctcccgcagtatctggcgttgaccccc
aggaagaagaggccttatgacaactggctggagggcgtgccacgctttctggcggggctg
atcttccagcctcccacccgctgcctgggagccctggtggggccatcggcggctgccttg
gcggacaggaagcagaaagtgcttgcgaagtacctgaagcggctgcagccggggaccctg
cgggctcgtcagctgctggagctgctgcactgcgcccacgaggccgaggaggctgggatt
tggcggcacgtggtgcaggagctccccgcccgcctctcgttcctgggcacccggctcaca
cctcccgacgcacatgtattgggcaaggccttggaggcggcgggccgagacttctccctg
gatctccgcagcactggcattgacccctcgggactggggagcctcgtgggactcagctgc
gtcactcatttcagggctgccttgagtgacacagtggcgctgtgggagtccctgcggcag
cgtggggagaccaagctacttcaggcagcagaagagaagttcaccatcgagcctttcaaa
gccaagtccctgaaggatgtggaagacctgggaaagctcgtgcagactcagaggacgaga
agttcctcagaagacacagctggggaactccctgctgttcgggatctaaagaaactggag
tttgcgctgggccccatctcaggcccccgggctttccccaaactggtgcggatcctcatg
gccttttcctccctgcagcatctggacctggacgcgctgagtgaaaacaagatcggggac
gagggagtctcccagctctcagccaccttcccccagctgaagtccctggaaaccctcaac
ttatcccagaacagcatcactgacgtgggagcctgcaaactcgcggaggccctgccttcc
ctcgcggcatccctgctcaggctaagcttgtataataactgcatctgtgacatcggtgcc
gagagcctggctcgtgtgcttccagacatggtgtccctccgggtgatggacgtccagtac
aacaaattcacagccgccggggcccagcagctcgccgccagccttcggaagtgccctcac
gtggagacactggcgatgtggacgcccaccatcccattcggtgtccaggaacacctacag
cagcaggactcacgaatcagcttgagatga
DBGET
integrated database retrieval system
