Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101050452
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Entry
101050452 CDS
T04350
Symbol
COL20A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101050452 (COL20A1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
Ig_DSCAM-DSCAML_C
DUF4959
Motif
Other DBs
NCBI-GeneID:
101050452
NCBI-ProteinID:
XP_010341499
LinkDB
All DBs
Position
Unknown
AA seq
1387 aa
AA seq
DB search
MCSRAPARLGLCLCLCLWLGTTLGREQGRASGHLRLAVLPEDQLQMKWRESEGSGLGYLV
QVKPMAGDSEQEVILTTKTPKATVGGLSPSKGYTVQIFELTGSGRVLLARREFVIEELKR
SSLDRSSRRSLSSGAPEPTPSLVGSPGPEQASEPRVAFQPSRDPPTPGGSQWRETAPQFH
CLPPMPADMVFLVDGSWSIGHSHFQQVKDFLASVIAPFEIGPDKVQVGLTQYSGDAQTEW
DLNSLGTKEQVLAAVRHLRYKGGNTFTGLALTHVLGQNLQPAAGMRPEAAKVVILVTDGK
SQDDVHTAARALKDLGVIVFAVGVKNADEAELRLLASPPQDITVHNVLGFPQLGALAGLL
SRLLCQRLQRGGPWQRPAAAPALDTLPAPTSLVLTQVTSSSVRLSWTPAPQLPLKYLIVW
QASRGGTPREVVVEGPAASVELHNLTSHTQYLVSVLPVYGGGVGEGLRGLVTTAPLPPPR
ALTLAALTPRTVHLTWQPSAGATHYLVQWLPASPKGEEEEREVQVGRPEVLLDGLEPGRD
YEVLVQSLRGLEASEPRGIHVRTPPPGPPRHLGFSDVSHDSVRVFWERIPRPVRLVRVTY
TSSEGGHSGQTEAPGNATSATLGPLSSSTTYTVRVTCLYPGGGSSTLTSRVTTKKVPSPS
QLSVTELPGDEVRLSWVAAAPSGVLVYQIKWTPLGEGRAREVSVPGNLGSAVLPGLGRHA
EYDVTILAYYRDGARSDPVSLRYAPSMVSRSPPSNLALASDTPDSLQVSWTPPRGPVLRY
QLTYAPASGSGPEKSVSVPGPRNHVTLPDLQAATKYRVLVSAVYTAGKSEAVSATGQTAT
CPALRPDGSLPGFDLMVTFGLVEKVYASIRGVAMEPPAFGATPTFTLFKDAQLTRRVSDI
HPAPLPPEHTIVFLVRLLPETPREAFALWQMTAEDFQPVLGVLLDAGRKSLTYFHRDPRA
ALQEATFDPQEVRKIFFGSFHKVHVAVGRSKVRLYVDCRKVAERPLGEVGSPPTAGFITL
GRLAKARGPRSSSAAFQLQMLQIVCSDTWADEDRCCELPASREGETCPAFASACTCSSET
PGPPGPEGPPGLPGRNGTPGEQGFPGPRGEPGPPGQMGPEGPGGQQGSPGTQGRTVQGPV
GPPGVKGEKGDHGLPGLQGHPGHQGIPGRVGLQGPKGMRGLEGTAGLPGPPGPRGFQGMA
GARGTTGDRGPPGAVGPTGLPGPKGERGEKGEPASLAAVYQLVSRACESAIQAHVSKFDS
FFHENTRPPMPILEQKLEPGTAPPGSPGTRREALLPGERGRGGRHLEGRGTGLPASPVHG
GSVGGGASCPLVLGLGPRSVSPQQPLLETPLSSLWGAGAGTLGSPEPTQSQPWCRGWPRP
GLPGTSR
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcccgagcccccgcacgcctcggcctctgcctctgcctctgcctgtggctgggg
accaccctgggacgagagcaaggacgtgcaagtggccacctgaggctggctgtgctgcct
gaggaccagctgcagatgaagtggagagagtcggaggggagcggccttggctacctggtg
caggtgaagcccatggcaggcgactcagaacaggaggtgatactgaccaccaagaccccc
aaggccaccgtggggggcctgagcccctccaagggctacaccgtgcagatcttcgagctc
accggctctgggcgcgtcctgctggctcggagggagtttgtgattgaggagctgaagagg
agctccctggacaggagcagccggaggagtctcagctctggagccccggagcccaccccc
tccctcgtggggagcccaggccctgagcaggcttcggagccccgagttgccttccagcca
agccgggatccgcccactcccggtgggtcgcagtggagggagactgccccccagtttcac
tgcctgccccccatgcctgctgacatggtcttcctggtggacgggtcctggagcatcggc
cacagtcacttccagcaggtcaaggacttcctggccagcgtcatcgcgccctttgaaatc
gggccggataaggtccaagtaggcctgacacagtacagcggggacgcccagaccgagtgg
gacctgaactccctcgggaccaaggagcaggtgctggcagccgtgcgccacctccgctac
aaggggggaaacacgttcacaggcctggccctgacccacgtgctgggacagaacctgcag
ccggcggccggcatgcgtccagaggcggccaaggtggtgattctggtgacggatggcaag
tcgcaggatgacgtgcacactgccgcccgcgccctcaaggacctgggtgtgattgtcttc
gcggtgggtgtgaagaacgcggatgaagctgagctgaggctcctggcgtccccgccgcag
gacatcaccgtccacaacgtgctgggcttcccacagcttggcgcgctggccggcctgctc
agccgcctcctctgccagaggctccagcgtgggggcccgtggcagcgtccagcggcggct
ccggccctggacaccctccctgcccccaccagcctggtcctgacccaggtgacctcctcc
agcgtccgcctgtcctggactccggccccgcagctgcccctcaagtatctgatcgtgtgg
caggcctccagaggtggcacccccagggaggtggtggtggaagggccggccgcctccgtg
gagctgcacaacctgacctcacacacacagtacctggtctccgtgctccctgtctacggg
ggcggggtcggcgagggcctgcggggcttggtgaccacagcacctctgcctccgccccgg
gcactgaccctggccgcactgacacccagaaccgtccacctcacctggcagccctcggcg
ggggccacccactacctggtgcaatggctgcctgcctccccgaagggggaggaggaggag
agagaggtgcaggtggggcggcccgaggtgctgctggacggcctggagccaggcagggac
tacgaggtcttggtgcagagcctgcggggcctggaggccagcgagccccggggcatccat
gtcaggacgccgcccccgggccccccgagacacctgggcttttcggatgtgagccatgac
tcggtgcgagtgttctgggagcgcatccccaggcctgtgcgcctggtcagggtcacctac
acgtccagcgagggcggacactcggggcagacagaggctcctgggaacgccacctcagcc
acgctggggcccctctcctcctccaccacctacaccgtccgcgtcacctgcctctacccc
gggggtggctcctccacgctgaccagccgggtcaccaccaagaaagtgcccagccccagc
cagctgtccgtgacggagctgccaggggacgaggtccggctgtcatgggtggctgcagcc
ccgtctggcgtgctcgtgtaccagatcaagtggacgcctctgggagagggcagggctcgt
gaggtctctgtcccggggaacctcggctcagctgtcttgcctggccttgggaggcacgcg
gagtacgacgtcaccatcctggcctactacagggacggggcccgcagcgaccctgtgtcc
ctccgctatgccccctccatggtgagcaggagccccccctccaacctggccctggcctcg
gacacccccgacagcctgcaggtcagctggacaccccctcgtggccccgtgctccgctac
cagctcacctacgcgcccgcctctggctcaggacctgagaaatccgtctccgtgccagga
cccaggaaccacgtgacactccccgacctgcaggcagccaccaagtacagggtcctggtg
tcagctgtctacacagcaggcaagagtgaggctgtgtctgccacgggccagacggcaacc
tgcccggccctccgccccgacggctccctcccagggtttgacctgatggtgaccttcggc
ctggtggagaaggtttatgcttccatccgaggcgtggccatggagccccctgcctttggt
gcgaccccgaccttcacgctcttcaaggacgcccagctgacaagacgagtcagtgacatc
cacccagccccgctcccgccagagcacaccatcgtcttcctcgtgcgcctgcttcccgag
acaccccgcgaggccttcgcgctgtggcagatgacagccgaggacttccagcctgtcctc
ggagttctcctggatgccgggaggaagtccctgacctacttccaccgagaccccagggct
gccttgcaggaggccaccttcgacccgcaggaagtgaggaagattttcttcgggagcttc
cacaaggtgcacgtggctgtgggccgctccaaggtccggctgtacgtggactgccggaag
gtggctgagcggcccctcggggaggtgggcagccctcccactgccggcttcatcacgctg
gggaggctggccaaggccaggggcccccggagcagctccgctgcgtttcagcttcagatg
ctgcagatcgtgtgcagtgacacctgggccgatgaggaccgatgctgtgagctccccgcc
tcgagggaaggagagacctgcccagccttcgcgtctgcctgtacctgttcctcagagacc
cctggacccccagggcccgaaggacccccaggcctcccagggaggaacggtaccccagga
gagcagggcttcccagggcccaggggagagccggggccacctggacagatgggaccagaa
ggccctggaggccagcaggggtcgccgggaacccagggccgcacagtccaggggcctgtg
ggtccaccaggggtcaaaggagagaagggggaccacgggctcccaggcttacagggccac
cccggccaccaaggcatccccgggagagttggccttcagggaccaaagggaatgaggggc
ctggagggaactgctggtcttcctggaccccctggccccaggggcttccagggcatggcg
ggagccaggggcactactggagaccgaggacccccaggggctgtgggacccacagggctg
ccggggcccaaaggagaacgaggcgagaagggcgagcccgcgtccctcgctgccgtctac
cagctcgtgagccgggcctgtgagtccgccatccaggcacacgtgtcaaagttcgactcc
ttcttccacgagaacaccaggccccccatgcccatcttggaacagaagctggagccgggt
actgctcccccggggtcccctggcacccgccgtgaggccctgcttcctggagaacggggg
cgtggtggccgccaccttgagggcagaggtactgggctcccggcctccccagtacacgga
gggagtgtggggggtggggccagctgtcccttggtcctggggctggggcctcgctccgtg
tcaccacagcagcccctgctggagacgccactgtccagcctctggggtgctggggcgggg
acactgggctctcctgagcctacgcaaagccagccatggtgcagaggttggcctcggcct
ggcctcccgggaacctcaaggtga
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