Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101051846
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Entry
101051846 CDS
T04350
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04151
PI3K-Akt signaling pathway
sbq04382
Cornified envelope formation
sbq04510
Focal adhesion
sbq04512
ECM-receptor interaction
sbq04518
Integrin signaling
sbq04820
Cytoskeleton in muscle cells
sbq04926
Relaxin signaling pathway
sbq04933
AGE-RAGE signaling pathway in diabetic complications
sbq04974
Protein digestion and absorption
sbq05146
Amoebiasis
sbq05165
Human papillomavirus infection
sbq05200
Pathways in cancer
sbq05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101051846 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101051846 (COL4A6)
04518 Integrin signaling
101051846 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101051846 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101051846 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
101051846 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
101051846 (COL4A6)
09158 Development and regeneration
04382 Cornified envelope formation
101051846 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101051846 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
101051846 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101051846 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
101051846 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101051846 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbq04147
]
101051846 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
sbq00536
]
101051846 (COL4A6)
Exosome [BR:
sbq04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101051846 (COL4A6)
Glycosaminoglycan binding proteins [BR:
sbq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101051846 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101051846
NCBI-ProteinID:
XP_010344668
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MGFPKGKKGSKGEPGPKGFPGVSGPPGFPGLGPTGEKGDKGSPGLPGPRGPMGSEGVQGP
PGQQGKKGSPGFPGLNGFQGTEGEKGDIGLPGPDVFIDIDGAVISGNPGDPGVPGLPGLK
GDEGIQGQRGPSGVPGLPALSGVPGALGPQGFPGLKGDQGNPGRTTIGAAGLSGRDGLPG
PPGPPGPPSPEFETETLHNKEPGFPGLRGEQGPRGNPGLKGVKGDSGFCACDGGVPSNGL
PGEPGPPGPQGLIGLPGLKGARGDQGSGGAQGPAGSPGFHGHPGLSGPKGDKGEPTFSTI
SGMKGDQGDPGSQGFPGVTGERGKDGIPGLPGLPGLPGDGGQGFPGEKGIPGLPGEKGQR
GLPGLPGIGLPGLPGPRGLPGDKGKDGLPGQQGTPGSKGITLPCIFPGSYGPSGFPGTPG
FPGPKGSRGLPGTPGPPGSRGNKGERGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKDG
LPGIIGSPGLPGSKGATGDIFGAENGAPGKQGLQGLPGDKGFIGDSGLPGLKGLHGKPGL
LGPKGEQGSPGTPGQVGEPGTPGSSGPYGIKGKSGLPGAPGFQGTSGHRGRKGTRGEKGL
PGSVMKKGLPGLKGLPGNPGLVGLKGSPGSPGITGLPALPGLKGDRGNPGPVGIPSPRHP
VSNLWFKGDKGSQGSAGSDGFPGPRGDKGEAGRPGPPGLPGVPGLPGTIKGVSGKPGPPG
FTGIQGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTLEISGSP
GLKGPPGESGFKGAKGRGGLTGSIGIPGNKGKDGEVGVPGDVGLPGAPGFLGTIGIRGEP
GLPGSSGHEGAIGPPGLPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAG
LPGPKGEKGNPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDP
GRPGLDGERGRPGPPGPSGPPGPSSNQGDTGEPGFPGTPGPQGPKGDLGIPGFSGLPGEL
GLKGMRGEPGFMGTPGKAGPPGDPGFPGMKGKAGPRGSSGPQGAPGQTPTAEAVQVPPGP
LGLPGIDGIPGLIGDPGVQGPVGLQGFKGLSGIPGKDGPNGLPGPPGALGDPGLPGLQGP
PGFEGAPGQQGPFGMPGMPGQSVRVGYTLVKHSQSEQVPLCPIGMSQLWVGYSLLFVEGQ
EKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVGQTQI
AQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSP
GSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGESPVSETLKAGQLHTRV
SRCQVCMKSL
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgggattccccaaagggaagaaaggatccaagggtgaaccagggcctaagggttttcca
ggcgtcagtggccctccaggctttccgggccttggacctactggagaaaagggagacaag
ggaagtcctggtttgccaggacctaggggtccaatgggttcagaaggagtccaaggccct
ccagggcaacagggcaagaaggggtccccaggatttcctgggcttaatggattccaggga
actgagggtgaaaagggtgacattggcctgccaggcccagatgttttcatcgatatagat
ggtgctgtgatctcaggtaatcctggagaccctggtgtacccggcctcccaggccttaaa
ggagatgaaggcatccagggccaacgcggcccttctggtgtccctggcttgccagcatta
tcaggtgtcccaggagccctagggcctcagggatttccaggactgaagggggaccaagga
aacccaggccgtaccacaattggggcagctggcctctctggcagagatggtttgccaggc
ccaccaggtccaccaggcccacctagtccagaatttgagactgaaaccctacacaacaaa
gagccagggttccctggtctccgaggagaacaaggtccaagaggaaacccaggcctcaaa
ggagtaaaaggagactcaggtttctgtgcttgtgacggtggtgtccccagcaatggacta
cctggggaaccaggcccacctggtccacaaggtctcataggccttccaggccttaaagga
gccagaggagatcaaggttctgggggtgcacagggcccagcagggtctccaggctttcat
gggcatccaggtctttcaggacccaaaggagacaaaggagagccaacgttcagtacaatc
tcaggaatgaaaggggatcagggtgatcctggctcccagggttttcctggtgtgacagga
gaacgaggaaaggatggaataccaggtttaccaggtctgccaggtcttccgggtgatggt
ggacagggcttcccaggtgaaaaggggataccaggacttcccggtgaaaaaggccaacgt
ggtctacctggcctcccaggaattgggttaccaggacttcctggaccccgtggacttccc
ggagataaaggcaaggatggattaccaggacaacaaggcacccctggatcgaagggaatt
accctaccttgtatttttcccgggtcatacggtccatcaggatttccaggcactcccgga
ttcccaggccctaaagggtcccgtggcctccctggaaccccaggcccgcctggatcacgt
ggaaataaaggagagcgagggagtccaggattggttcatcttcctgaactaccagggttt
cctggacctcgtggggagaagggcttgcctgggtttcctgggctcccaggaaaagatggc
ttgcctgggataattggcagtccaggtttacctggttccaagggagccactggtgacatc
ttcggtgctgaaaatggtgctccagggaaacaaggcctacaaggattgccaggcgacaaa
ggatttattggagattctggccttccaggactcaagggtttgcacgggaaacctggcttg
ctgggccccaaaggtgagcagggcagccctggaacaccaggacaggtgggagagccaggc
accccaggatctagtggtccatatggcatcaagggcaaatctggactcccaggagctcca
ggcttccaaggtacttcaggacatcggggaaggaaaggaactagaggagagaaaggtctt
cccggatcagttatgaagaaagggctgccaggactgaaaggccttcctggaaatccaggc
ctggtaggacttaaaggaagcccaggctctccagggatcactgggttgccagccctccct
ggactcaagggagacagaggcaatccagggccagtcggaatacctagtccaagacatcca
gtgtcaaacctttggttcaaaggagacaaaggctctcaaggctcagcaggatccgatgga
tttcctgggcctagaggtgacaaaggagaggctggtcgacctgggccaccaggcctgcct
ggagttcctggcctcccaggcactatcaaaggagttagtggaaagccagggccccctggc
ttcacaggaatccagggcttacctggcctgaagggatcttccgggatcacaggtttccca
ggaatgccaggagaaagtggttcgcaaggtatcagagggtcacctggactcccaggagca
tctggtctcccgggcctgaaaggagacaacggccagacacttgaaatttccggtagccca
ggactgaagggaccacctggtgaatctggttttaaaggtgcaaaaggaagaggtggacta
acgggcagcataggtatccctggaaacaaaggcaaagatggagaagttggtgttcctgga
gatgttggccttcccggagctccaggatttctggggactataggcatcagaggagaacca
ggacttccaggttcttctggtcatgaaggggcaattgggcctccaggactccccggatta
ataggacccaaaggcttccctggatttcctggtttacatggactgaatgggcttccaggc
accaagggtacccatggcactccaggacctagtatcactggtgtgcccgggcctgccggt
ctccctggacccaaaggagaaaaaggaaatccaggaattggcatcggagctccagggaag
ccgggcctgagagggcaaaagggtgatcgaggtttccccggtctccagggccctgctggt
ctccctggtgccccaggcatctccttgccctcactcatagcaggacagcctggtgacccc
gggcgaccaggcctagatggagaacgaggccgcccaggcccccctgggccctcaggtccc
cctgggccatcctcgaatcaaggtgacactggagaacctggcttccctggaactcccgga
cctcaggggcctaagggagacctaggaattccaggtttttctggcctccctggagagcta
ggactgaaaggcatgagaggtgagcctggcttcatggggaccccaggcaaggctgggcca
cctggagacccaggatttcccgggatgaaggggaaggcagggccaagaggctcttccggc
ccccaaggtgctccgggacaaacaccaactgcagaagctgtccaggttcctcccgggccc
ttgggtctaccaggcattgacggcatccctggcctcattggggaccctggggttcaaggc
cctgtaggcctacaaggcttcaaaggtttatctggcatccctggcaaagatggccccaat
gggctcccaggcccacctggggctcttggtgatcctggtctgcctggactgcaaggccct
ccaggatttgaaggagctccagggcagcaaggccccttcgggatgcctggaatgcctggc
cagagcgtgagagtgggctacacattggtaaagcacagccagtcggaacaggtgcccctg
tgtcccatcgggatgagtcagctgtgggtggggtacagcttactgttcgtggagggacag
gagaaagctcacaaccaggatctgggctttgctggctcctgtctgccccgcttcagcacc
atgcccttcatctactgcaacatcaacgaggtgtgccactatgccaggcgcaatgataaa
tcctactggctctccactaccgcccctattcccatgatgcccgtcggccagacccagatt
gcccagtacatcagccgctgctctgtgtgtgaggcgccatcacaagccattgctgtgcac
agccaggacatcaccatcccacagtgccccctgggctggcgcagcctctggattggatac
tccttcctcatgcacactgccgctggtgccgagggtggaggccagtccctggtctcacct
ggatcctgcctagaggactttcgggccactcctttcatcgagtgcagtggtgcccgaggc
acctgccactactttgcaaacaagtacagtttctggttgactacagtggaggagaggcag
cagtttggggagtcgcctgtgtctgaaacgctgaaagctgggcagctccacacccgagta
agtcgctgccaggtgtgtatgaaaagcctgtag
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integrated database retrieval system
