Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101052445
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Entry
101052445 CDS
T04350
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03082
ATP-dependent chromatin remodeling
sbq04714
Thermogenesis
sbq05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101052445 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101052445 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101052445 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbq03021
]
101052445 (SMARCA4)
03036 Chromosome and associated proteins [BR:
sbq03036
]
101052445 (SMARCA4)
Transcription machinery [BR:
sbq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101052445 (SMARCA4)
Chromosome and associated proteins [BR:
sbq03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
101052445 (SMARCA4)
Chromatin remodeling factors
BAF complex
101052445 (SMARCA4)
PBAF complex
101052445 (SMARCA4)
GBAF(ncBAF) complex
101052445 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
101052445
NCBI-ProteinID:
XP_010327866
LinkDB
All DBs
Position
Unknown
AA seq
1839 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKKMTGKDIHDTASSAARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKK
SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA
VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD
VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES
ESRSVKVKIKLGRKEKAQDRLKGSRRRPSRGSRAKPVVSDDDSEEEQEEVRPGPRAGMAG
RGSGQQEAAQGPDGMALQGDTPTLQMGKLRLHIPCSTVAPQFGVTVVQRGCMCVTVHSSY
CILLDRSDSPGSGEGMSVSLDVNHTKTHGARFTEADPEGAAGEEDLPGYAGGLCCCSSPA
CVHLGPAVRGAGGSAPSLPLAKAGLGRPSQKQKSSRSGP
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggcggaactcctcggccaggtccttccccaggccct
ggcccttcccctggagccatgctgggccctagccctggtccctcaccgggctccgcccac
agcatgatggggcccagcccagggcccccctcagcaggacaccccatccccacccagggg
cctggagggtaccctcaggacaacatgcaccagatgcacaagcccatggagtccatgcac
gagaagggcatgtcggacgacccgcgctacaaccagatgaaaggaatggggatgcggtcg
ggcggccacgctgggatggggcccccgcccagccccatggaccagcactcccaaggttac
ccctcgcccctgggtggctctgagcatgcctctagtccagttccagccagtggcccatct
tcaggtccccagatgtcttccggcccaggaggggccccactggatggtgccgacccccag
gccttggggcagcagaaccggggcccaaccccatttaaccagaaccagctgcaccagctc
agagctcagatcatggcctacaagatgctggccagggggcagcccctccctgaccacctg
cagatggccgtgcagggcaagcggccgatgcctgggatgcagcagcagatgccaacgcta
cctccaccctcggtgtccgctacagggcctggccccggccctggccccggccccggcccg
ggtcctggcccggcaccgccaaattacagcaggcctcatggtatgggagggcccaacatg
cccccaccaggaccctcaggtgtgccccctgggatgccgggccagcctcctggagggccc
cccaagccctggcctgaaggacccatggcaaatgctgctgcccccacgagcaccccccag
aagctgatcccccctcagccaacaggccgcccttcccctgcgccccctgctgtcccacct
gccgcctcgcctgtgatgccaccccagacccagtcccccgggcagccggcccagcctgcg
cccatggtgccgctccaccagaagcagagccgcatcacccccatccagaagcctcggggc
ctcgaccctgtggagatcctgcaggagcgcgagtacaggctgcaggctcgaatcgcacac
cgaattcaggaacttgaaaaccttcccgggtccctggccggggatttgcgaaccaaagcg
accattgagctcaaggccctcaggctgctgaacttccagaggcagctgcgccaggaagtg
gtggtgtgcatgcggagggacacggcgcttgagacggccctcaatgccaaggcctacaag
cgcagcaagcgccagtccctgcgcgaggcccgcatcactgagaagctggagaagcagcag
aagatagagcaggagcgcaagcgccggcagaagcaccaggaatacctcaacagcattctc
cagcatgccaaggatttcaaggaatatcacagatcggtcacaggcaaaatccagaagctc
accaaggcagtggccacttaccatgccaacacggagcgggagcagaagaaagagaatgag
cggatcgagaaggagcgcatgcggaggctcatggctgaagatgaggagggttaccgcaag
ctcatcgaccagaagaaggacaagcgcctggcctacctcttgcagcagacagacgagtac
gtggccaacctcacagagctggtgcggcagcacaaggctgcccaggtcgccaaggagaaa
aagaagaaaaagaaaaagaagaaggcggaaaacgcagaaggacagacacctgctattggg
ccagatggtgagcctctggatgagaccagccagatgagcgacctcccggtgaaagtgatc
cacgtggagagcgggaagatcctcacaggcacagacgcccctaaagctgggcaactggag
gcctggctggaaatgaacccggggtatgaggtagctccgagatctgatagtgaagaaagt
ggctcagaagaagaggaagaggaggaggaggaggagcagccccaggcagcgcagcctccc
accctgcccgtggaggagaagaagaagattccagatccagacagcgacgacgtctctgag
gtggacgcacggcacatcatcgagaatgccaagcaagatgtcgatgatgagtacggcgtg
tcccaggcccttgcgcgtggcctgcagtcctactatgctgtggcccacgctgtcacagag
agagtggacaagcagtcggcacttatggtcaatggtgtcctcaaacagtatcagatcaaa
ggcttggagtggctggtgtccctgtacaacaacaacctgaatggcatcctggccgatgag
atgggcctggggaagactatccagaccattgctctcatcacttacctcatggagcacaaa
cgcatcaatgggcccttcctcatcatcgtgcctctctcaacgctgtccaactgggcgtac
gaattcgacaagtgggccccgtccgtggtgaaggtgtcctacaagggatccccggccgca
agacgggccttcgtcccccagctccggagcgggaagttcaacgtcttgctgacgacatat
gagtacatcatcaaagacaagcacatcctcgccaagatccgttggaagtacatgatcgtg
gatgaaggtcaccgcatgaagaaccaccactgcaagctgacgcaggtgctcaacacgcac
tatgtggcgcctcgccgcctgctgctgacgggcacaccgctgcagaacaagctccccgag
ctctgggcgctgctcaacttcctgctgcccaccatcttcaagagctgcagcaccttcgag
cagtggttcaatgcaccgtttgccatgaccggggaaaaggtggacctgaatgaggaggaa
accattctcatcatccggcgtctccacaaagtgctgcggcccttcctgctccgacggctc
aagaaggaagtcgaggcccagttgcccgaaaaggtggagtacgtcatcaagtgcgacatg
tctgcactgcagcgagtactctaccgccacatgcaggccaagggcgtgctgctgactgat
ggctccgagaaggacaagaagggcaaaggtggcaccaagaccctgatgaataccatcatg
cagctgcggaagatctgcaaccacccctacatgttccagcacatcgaggagtccttttct
gagcacttggggttcactggtggcatcgtccaagggctggacctgtaccgagcctcgggt
aaatttgagcttctcgatagaattcttcccaaactccgagcaaccaaccacaaagtgctg
ctgttctgccaaatgacctccctcatgaccatcatggaagattactttgcgtatcgcggc
tttaaatacctcaggcttgatggaaccacgaaggcagaagaccggggcatgctgctgaaa
accttcaacgagcccggctccgagtacttcatcttcctgctcagcacccgggccgggggg
ctcggcctgaacctccagtcggctgacactgtgatcattttcgacagcgactggaatcct
caccaggacctgcaagcgcaggaccgagcccaccgcatcgggcagcaaaacgaggtgcgc
gtgctccgcctctgcacggtcaacagtgtggaggagaagatcctggctgcggccaagtac
aagctcaatgtggaccagaaggtgatccaggccggcatgttcgaccagaagtcctccagc
cacgagcggcgcgccttcctgcaggccatcctggagcacgaggagcaggatgagagtaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaggaagatgaggtgcccgatgatgag
actgtcaaccagatgattgcccggcacgaggaggagtttgacctgttcatgcgcatggac
ctggaccgcaggcgtgaggaggcccgcaaccccaagcggaagccgcgcctcatggaggag
gacgagctcccctcgtggatcatcaaggacgacgcagaggtggagcggctgacctgcgag
gaggaggaggagaagatgtttggccgtggctcccgccaccgcaaggaagtggactacagc
gactcactaacggagaagcagtggctcaagaaaatgacaggaaaagatatccatgacaca
gccagcagtgcggcacgggggctacaattccagcgtggccttcagttctgcacacgtgca
tcaaaggccatcgaggagggcacgctggaggagatcgaagaggaggtccggcagaagaaa
tcgtcacggaagcgcaagcgagacagtgacgccggctcctccaccccgaccaccagcacc
cgcagccgtgacaaggacgatgagagcaagaagcagaagaagcgcgggcggcctcccgct
gagaagctctccccgaacccgcccaacctcaccaagaagatgaagaagatcgtggatgct
gtgatcaagtacaaggacagcagcagtggacggcagctgagtgaggtcttcatccagctg
ccctctcgaaaggagctgcccgagtactacgagctcatccgcaagcccgtggacttcaag
aagataaaggagcgcatccgcaaccacaagtaccgcagcctcaatgacctagagaaggac
gtcatgctgctgtgccagaacgcgcagaccttcaacctggagggctccctgatctatgaa
gactccatcgtcctgcagtcggtcttcaccagcgtacggcagaaaattgagaaggaggat
gacagcgaaggcgaggagagtgaggaggaggaagaaggcgaggaggaaggctctgaatct
gagtctcgatctgtcaaagtgaagatcaagcttggccggaaggagaaggcacaggaccgg
ctaaaaggcagccggcggcggccgagccgagggtcccgagccaaaccagttgtaagtgac
gacgacagtgaggaggaacaagaggaggtgaggccaggccccagggcaggcatggcaggc
aggggtagcgggcagcaggaggcagcccagggccctgacgggatggccctgcagggcgat
actcccactctgcagatgggaaaactgaggcttcacattccatgcagtactgtcgcgccg
cagtttggagtcactgtagttcagcgtggatgcatgtgcgtcaccgtccactcctcgtac
tgtattttactggacaggtcagactcgccggggtccggcgagggtatgtcagtgtcactg
gatgtcaatcacaccaaaacccatggggcccgtttcacagaggcagaccctgaaggcgcg
gcaggggaagaggacttgcctggctacgcgggtggcctttgctgctgcagctctccagca
tgtgttcacctgggtcctgcggtgcggggagcaggcggctccgccccttccctgcctttg
gccaaggctgggttggggagaccctcacagaaacagaagagctctcggtcaggcccatga
DBGET
integrated database retrieval system
