Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101053695
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Entry
101053695 CDS
T04350
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X2
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04613
Neutrophil extracellular trap formation
sbq05014
Amyotrophic lateral sclerosis
sbq05034
Alcoholism
sbq05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
101053695 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101053695 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101053695 (HDAC6)
09165 Substance dependence
05034 Alcoholism
101053695 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbq01009
]
101053695 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbq03019
]
101053695 (HDAC6)
04131 Membrane trafficking [BR:
sbq04131
]
101053695 (HDAC6)
03036 Chromosome and associated proteins [BR:
sbq03036
]
101053695 (HDAC6)
Enzymes [BR:
sbq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101053695 (HDAC6)
Protein phosphatases and associated proteins [BR:
sbq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101053695 (HDAC6)
Messenger RNA biogenesis [BR:
sbq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101053695 (HDAC6)
Membrane trafficking [BR:
sbq04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
101053695 (HDAC6)
Chromosome and associated proteins [BR:
sbq03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
101053695 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
101053695
NCBI-ProteinID:
XP_003939595
UniProt:
A0A2K6T2X8
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MTSTGQDSTTTRQRRSRQNPQSSPQDSSVTSKRNIKKGAVPRSIPNLAEVKKKGKMKKLG
QAIEEDLIVGLQGMDLNLEAEALAGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMKEGELRVLADTYDSVYLHPNS
YSCACLATGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQG
QGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSA
QASVSCALEALEPFWEVLVRSTDTVEGDNVEEDNVEENEDEGPWEPPVLPILTWPVLQFR
TGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLPPRPATEAELFTCH
SAEYIARLRATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVLSGEVLN
GAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHMF
EDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRIGDADYLAAWH
RLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEG
GYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASITETIQVHRRYWRSLRVMKVE
DKEGPSSSKLITKKAPQPAKPTLAEQMLTREKKVLEASMGKAISLSREESTADQIKSETA
VVAVTQDQSSEAAMGGATPAQTISKAAIGGAMLGQTTSEEAVGGATPDHTTSEETVGGAT
LDQTTSEDAVRGATLAQTTSEAVGGATLAQTTSEAAMEGATLDQTTSEEALGGTELIQTP
LTLSTDHQRPPTSPVQGTTPQIPPSTLIGSLRTLELGSESQGALESQAPGEENLLGEAAG
GQDMADSMLMQGSKGLTDQAIFYAVTPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQEN
WVCLSCYQVYCGRYINAHMLRHHGNSGHPLVLSYVDLSTWCYYCQAYVHHQALLDVKNIA
HQNKFGEDMPHPY
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaaccggccaggattccaccacaaccaggcagcgaagaagtaggcagaacccc
cagtcgtcccctcaggactccagtgtcacttcgaagcgaaacattaaaaagggagccgtt
ccccgctccatccccaatctagcagaggtaaagaaaaaaggcaaaatgaagaagctcggc
caagcaatcgaagaagacctaatcgtgggactgcaggggatggatctgaaccttgaggct
gaagcactggctggcactggcttggtgttggatgagcagctaaatgaattccattgcctc
tgggatgacagcttcccggaaggccctgagcggctccatgccatcaaggagcaactgatc
caggagggcctcctagatcgctgtgtatcctttcaggcccggtttgctgaaaaggaagag
ctgatgttggttcacagcctagaatatattgatctgatggaaacaacccagtacatgaag
gagggagaactccgcgtcctagcagacacctatgactcagtttatcttcatccgaactca
tactcctgtgcctgcctggccactggctctgtcctcaggctggtggatgcggtcctaggg
gctgaaatccggaatggcatggccatcattaggcctcctggacatcacgcccaacacagt
cttatggatggctattgcatgttcaaccacgtggctgtggcagcccgctatgctcaacag
aaacaccgcatccggagggtccttatcgtggattgggatgtgcaccatggtcaaggaaca
cagttcaccttcgaccaggaccccagtgtcctctatttctccatccaccgctacgagcag
ggtaggttctggccccacctgaaggcctctaactggtccaccacaggttttggccaaggc
caaggatataccatcaatgtgccttggaaccaggtggggatgcgggatgctgactacatt
gctgctttcctgcacgtcctgctgccagttgcccttgagttccagcctcagctggtcctg
gtggctgctggatttgatgccctgcaaggggaccccaagggtgagatggccgccactcca
gcagggttcgcccagctaacccacctgctcatgggtctggcaggaggcaagctgatcctg
tctctggagggtggctacaacctccgtgccctggctgaaggtgtcagtgcttcgcttcac
acccttctgggagatccttgccccatgctggagtcccctggtgccccctgccggagtgcc
caggcttcagtttcctgtgccctggaagcccttgagcccttctgggaggttcttgtgaga
tcaactgataccgtggaaggggacaacgtggaggaggacaatgtagaggagaacgaagat
gaaggaccctgggagcccccagtgcttccaatcctgacatggccggtgctacagtttcgc
acagggctggtctatgaccagagtatgatgaatcactgcaacttgtgggacagccaccac
cctgaggtaccccagcgcatcttgcggatcatgtgccgtctagaggagctgggacttgct
gggcgctgcctcaccttgccaccgcgccccgccacagaggctgagctgttcacctgccac
agtgctgagtatatagctcgtctccgggccacagagaagatgaaaacccgggagctgcac
cgggagagttccaactttgactccatctacatctgccccagcacctttgcctgtgcacag
cttgccactggtgctgcctgccgcctggtggaggctgtgctctcaggagaggttctgaat
ggtgctgctgtggtgcgtcccccaggacaccatgcggagcaggacgcagcttgcggtttt
tgctttttcaactctgtggctgtggctgctcgccatgcccaggctatcagtgggcatgcc
ctgcggatcctgatcgtggattgggatgtccaccatggtaatggaactcagcacatgttt
gaggacgatcccagtgtactgtatgtgtccctgcaccgctacgatcatggcaccttcttc
cccatgggagatgagggtgccagcagccagatcggccgggctgcaggcacaggcttcacc
gtcaacgtggcatggaatgggccccgcataggtgatgctgactacctagctgcctggcat
cgcctggtgcttcctatcgcatacgagtttaacccagaactggtgctggtctcagctggc
tttgacgctgcacggggggacccgctggggggctgccaggtgtcacctgagggttacgcc
cacctcacccacctgctgatgggccttgccagtggccgcattatccttatcctagagggt
ggctataacctgacatccatctcagagtccatggctgcctgcactcgctccctccttgga
gacccaccacccctgctgaccctgccacggcccccactatcaggggccctggcctcaatc
actgagaccatccaagtccatcgcagatactggcgcagcttacgggtcatgaaggtagaa
gacaaagagggaccctccagttctaagctgatcaccaagaaggcaccccaaccagccaaa
cctacgttagctgagcagatgctcacacgagaaaagaaggttctggaagcaagcatgggg
aaggccatctcgctgtctagggaagagtccactgcagaccagattaagtcagagacagct
gtggtggcagtcactcaggaccagtcctcagaggcagccatggggggagccacaccggcc
cagaccatctccaaggcagccattgggggagccatgctgggccagaccacctcagaggag
gctgtcgggggagccactccggaccacaccacctcagaggaaactgtgggaggagccact
ctggaccagaccacctcagaggatgctgttaggggagccactctggcccagactacctca
gaggctgtaggaggagctacactggcccagaccacctcagaggcagccatggagggagcc
acactggaccagactacgtcagaggaagctctagggggcaccgagctgatccaaactcct
ctaaccttgagcacagaccaccagaggcccccaacgtcacctgtgcagggaactacaccc
cagatacctcccagtacactgattgggagtctcaggaccttggagctaggcagcgaatct
cagggggccctagaatctcaagccccaggagaggagaacctactaggagaggcagctgga
ggtcaggacatggctgattcgatgctgatgcagggatctaagggcctcactgatcaggcc
atattttatgctgtgacaccactgccctggtgtccccatttggtggcagtatgccccata
cctgcagcaggcctggacgtgacccaaccttgtggggactgtggaacaatccaagagaat
tgggtgtgtctctcttgctatcaggtctactgtggtcgttacatcaatgcccacatgctc
cgacaccatggaaactctggacacccactggtcctcagctacgtcgacctgtcgacctgg
tgttactactgtcaggcctatgtccaccaccaggccctcctagatgtgaagaacatcgcc
caccagaacaagtttggggaggatatgccccacccatactaa
DBGET
integrated database retrieval system
