Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101053993
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Entry
101053993 CDS
T04350
Name
(RefSeq) protocadherin alpha-12
KO
K16493
protocadherin alpha
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
101053993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbq03036
]
101053993
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbq04515
]
101053993
Chromosome and associated proteins [BR:
sbq03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
101053993
Cell adhesion molecules [BR:
sbq04515
]
Cadherins
Protocadherins
101053993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_FAT4_N
Ig_Cad99C_N
Cadherin_C_2
Ig_CLSTN
Ig_BT4661_3rd
UvrC_RNaseH_dom
Motif
Other DBs
NCBI-GeneID:
101053993
NCBI-ProteinID:
XP_010340077
LinkDB
All DBs
Position
Unknown
AA seq
1785 aa
AA seq
DB search
MFGFQRRELGTPRLLLWLLLLEFWEVGSGQLHYTVPEEAKHGTFVGRIAQDLGLELAELV
PRLFRVASKTHGDLLEVNLQNGILFVNSRIDREDLCGQSAKCSIHLEVIVDRPLQVFHVD
VEVKDINDNPPVFSLKEQRLRIAESKQPDSRFPLEGASDADIEENALLTYRLSQNEYFSL
DSSTNSKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGIVQLLVQVLDVNDNDP
EFDQSEYKVSLMENAAKETLVIKLNATDRDEGVNGEVTYSLMSVKPNGRPLFTLDQNNGE
VRVNGILDYEENKFYKIEVQAIDKGTPPMAGHCTVWVEILDTNDNFPEVTVTSLSLPIRE
DTQPSTVIALISVSDRDSGVNGQVTCSLTPQVPFKLVSTFKNYYSLVLDSDLDRETVSAY
ELVVTARDGGSPSLWATASVSVEVADVNDNAPAFEQPEYTVFVKENNPPGCHIFTVSARD
ADAQENALVSYSLVERRVGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAG
VPPLGSNVTLQVFVLDENDNAPALLATRAGSAGGTVSELLPRSVGAGHVVAKVRAVDADS
GYNAWLSYELQPAAGGSRNLFRVGLYTGEISTTRVLDEADSLRHRLLVLVKDHGEPALTA
TATVLVSLVESGQAPKASSRALVGPASPEATLVGVNVYLIIAICVVSSLLVLTLLLYTAL
RCSAMPIEGECAPGKPTLVCSSAVGSWSHSQQRRHRVCSGEGPPKTDLMAFSPSLPPGLN
KEEERERQEAGSSHPGQDRLHIYHNAGKNLLNMYLQKRVTAHRIPQASDPLKLIFPTQRP
SFSAMVIIWPRGPGSQPLLFSLLLLAAWEVGSGQLHYTVPEEAKHGTFVGRIAQDLGLEL
AELVPRLFRVASKTHGDLLEVNLQNGILFVNSRIDREKLCGRSAECSIHLEVIVDRPLQV
FHVDVEVKDINDNPPVFREREQKVPVSESAPLDSHFPLEGASDADIGVNSLLTYTLSLNE
HFELKIKTKKDKSILPELVLRKLLDREQTPKLDLLLMVIDGGKPQLTGSVQIQVTVLDVN
DNGPAFDKPSYKVVLSENVQNDTKVIQLNASDPDEGLNAEISYGIKMILPVSEKCVFSIN
PDTGEIKIYGELDFEENNAYEIQVNAIDKGIPSMAGHSMVLVEVLDVNDNVPEVVVTSLS
LPVQEDAQVGTVIALISVSDRDSGANGQVICSLTPHVPFKLVSTYKNYYSLVLDSALDRE
TVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPTFAQPEYTVFVKENNPPGCHIFT
VSAQDADAQENALVSYSLVERRVGDRALSSYVSVHAESGKVYALQSLDHEELELLQFQVS
ARDAGMRPLGSNVTLQVFVLDENDNAPALLATGAGIAGGAVSELVPRSVGAGHVVAKVRA
VDADSGYNAWLSYELQPAAVGALIPFRVGLYTGEISTTRILDEADAPRHRLLVLVKDHGE
PALTTTATVLVSLVENGQSPKASLRASVGAVGPEMALVDVNVYLIIAICAVSSLLVLTLL
LSTALRCSAPPTVSGCASGKPTQVCSSAAGSWSYSQQRRQKVCSGEGAPKTDLMAFSPSL
QLSREDCLSPPSEPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSA
TPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPTN
SQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttttcagagaagggaattgggtaccccacgactgctgctctggcttctccta
ctcgaattctgggaggtggggagcggtcagctccactacactgtaccagaggaggccaaa
cacggcactttcgtgggccgcatcgcgcaggacctggggctggagctggcggagctggtg
ccgcgcctgttccgggtggcgtccaagacacacggggaccttctggaggtaaatctgcag
aatggcattttgtttgtgaattctcggatcgatcgggaggacctgtgcgggcagagcgcg
aagtgcagcatccacctggaggtgatcgtggacaggccactgcaggttttccatgtggat
gtagaggtgaaggacattaacgacaacccgccggtgttctctctcaaagaacaaaggctg
cggattgcggaatctaagcaaccggactcgcgttttccactagagggagcttctgatgct
gatattgaagagaacgcgctattgacctacaggctaagtcaaaatgagtatttttcttta
gactcatcaacaaatagtaagcagattaaaagactgtcacttattttaaagaagtctcta
gatagagagaaaactccggaacttaatttgctactaacggctacagacggggggaaaccg
gagcttactggcattgttcagctgttagtccaagtcttggacgttaacgacaatgatcca
gagtttgatcaatcagaatacaaggtgagtcttatggaaaacgctgctaaagagactctc
gtgataaaattaaacgccacagaccgagacgaaggcgtcaacggagaggtaacatactcc
ttaatgtcagttaagcccaacggaagacccttatttacactagatcaaaataatggagaa
gtgagggtcaatggaattttagattacgaagaaaacaaattttataaaattgaagtacag
gctatcgataaggggactcccccaatggcaggtcactgtacagtctgggtagaaatctta
gacaccaacgataactttcctgaagtcactgtgacttccttgtccctcccaatacgagag
gacactcagcccagcacggtcattgccctgatcagcgtgtctgaccgtgactcaggtgtc
aacggacaggtgacctgctcgctgacgccccaggtccccttcaagctggtgtccaccttc
aagaattactactcattggtgctggacagcgacctggaccgagagaccgtgtcggcctat
gagctggtggtgaccgcgcgggacgggggctccccttcgctgtgggccacggccagcgtg
tccgtggaggtggccgacgtgaacgacaacgcgccggcgttcgagcagcccgagtacacg
gtgttcgtgaaggagaacaacccgccgggctgccacatcttcacagtatctgcacgggac
gcggacgcgcaggagaacgcgctggtgtcctactcgctggtggaacggcgggtgggcgat
cgcgcgctgtcgagctacgtgtcagtgcacgcggagagcggcaaggtgtacgcgctgcag
ccgctggaccacgaggagctggagctgctgcagttccaggtgagcgcgcgcgacgcgggg
gtgccgcctctgggcagcaacgtgacgctgcaggtgttcgtgctggacgagaacgacaat
gcaccggcgctgctggcgactcgagctggcagtgcgggaggcacagttagcgagctgtta
ccgcggtcggtgggtgcgggccacgtggtggcgaaggtgcgtgcagtggatgctgactca
ggctacaacgcgtggctttcatatgaactgcagcctgcggctggcggctctcgcaacctg
ttccgcgtggggctgtacaccggcgagatcagcacaacgcgtgtcctggacgaggcggac
tcgctgcgccaccgccttctggtgctggtgaaggaccacggtgagccggcgctgacggcc
accgctaccgtgctggtgtcgttagtagagagcggacaggcgccaaaggcctcgtcgcgg
gcattggtgggccccgcgagcccagaggctacgctggtgggtgtcaacgtgtacttgatc
atcgccatctgcgtggtatctagtctgctggtgctcacgctgttgttatacacggcgctg
cggtgctccgctatgcccattgagggcgagtgcgctcccggcaagcccacgctggtgtgc
tccagcgcggtggggagctggtcgcactcgcagcagaggcggcacagggtgtgctctggg
gagggcccacctaagacggacctcatggccttcagccctagtcttcctccaggtctgaat
aaagaggaggaaagggaaagacaggaggcagggtcaagtcacccgggacaggatcgactc
catatttaccataatgctggaaaaaatttattgaatatgtacttacagaaaagggtgact
gctcatagaatacctcaggcgagcgatcctttaaaactgattttcccaactcagaggccc
tcattttctgcaatggtgattatctggccaagaggcccgggatcccagcctctgctgttc
tcgcttttgctcctcgcagcctgggaggtggggagcggtcagctccactacaccgtacca
gaggaggccaaacacggcactttcgtgggccgcatcgcgcaggacctagggctggagctg
gcggagctggtgccgcgcctgttccgggtggcgtccaaaacacacggggaccttctggag
gtaaatctgcagaatggcattttgtttgtgaattctcggattgaccgcgagaagctgtgc
gggcggagcgcggagtgcagcatccatctggaggtgatcgtggacaggccgctgcaggtt
ttccatgtggatgtggaggtgaaggacattaacgacaatccgccggtgtttagagagagg
gaacaaaaggtacctgtttctgaatctgcgcctctggactctcattttcctctagagggc
gcttctgatgcggatatcggcgtaaactctcttttgacctatacgttaagtctaaacgag
cattttgagcttaaaataaaaacaaaaaaagataaaagtatactgcctgaattagttctt
cgcaagttattggacagagagcaaacgccaaagctcgatttattgctgatggtaatcgat
ggcggtaaaccacagctaacagggtctgttcagattcaagtaaccgtcctggatgtgaat
gacaacggtccggcgtttgataagcccagctacaaagtagttttgtctgaaaatgtccaa
aacgacacgaaagtgatccaactaaacgcttccgatccagacgaaggactgaatgcagaa
atttcctatgggatcaaaatgattttgccagtgagtgagaaatgtgtgttttcaataaat
ccagacacaggtgaaattaaaatttatggtgaactggattttgaagagaataatgcctat
gaaattcaggttaacgcaattgataaagggattccttccatggcaggtcacagcatggtc
ctggtggaagttctggacgtgaatgacaatgtccctgaagtagtggttacttccctgtcg
ctccctgtgcaagaggatgctcaggtgggtactgtcatcgccctgatcagcgtgtcggat
cgtgactctggagccaatggacaggtcatctgctcactgacacctcatgtccccttcaag
ttggtgtccacctacaagaattattactcattggtgctggacagcgccctggatcgtgag
acggtgtctgcctatgagctggtggtgactgcgagggacgggggctccccttcgctgtgg
gccacggccagcgtgtccgtggaggtggccgacgtgaacgataacgcgccgacgttcgcg
cagcccgagtatacggtgtttgtgaaggagaacaacccgccgggctgccacatcttcact
gtgtcggcgcaggacgcggacgcgcaggagaacgcgctggtgtcctactcgctggtggag
cggcgggtgggcgatcgcgcgctgtcgagctacgtgtcggtgcacgcggagagcggcaag
gtgtacgcgctgcagtcgctggaccacgaggagctggagctgctgcagttccaggtgagc
gctcgtgacgcgggcatgcgacctctgggcagcaacgtgacactgcaggtgttcgtgctg
gacgagaacgacaacgcgccagccctgctggcaactggggctggcatcgcgggaggtgca
gtgagcgagcttgtaccgcggtctgtgggtgcaggccacgtggtggcgaaggtgcgcgcg
gtggacgctgactccggctataacgcttggctgtcctacgagttgcaacctgcggcggtt
ggcgcgctcatcccgttccgcgttgggctgtacacgggcgaaatcagcacgacacgcatc
ctggacgaggcggacgctccgcgccaccgcctgctggtgctggtgaaggaccatggcgag
cccgcgctgacgaccacggccactgtgctagtgtcgctggtggagaacggccagtctcca
aaagcgtcgttgcgagcctcggtgggcgctgtaggtcccgaaatggcgctggtggatgtc
aacgtgtacctgatcatcgccatctgtgcggtgtccagcctgttggtgctcacgctgctg
ctgtccacggcgctgcggtgctctgcgcctcctactgtgagcgggtgcgcctcgggcaag
cccacacaggtttgctccagcgccgcggggagttggtcttactcgcagcagaggaggcag
aaggtgtgctctggagagggcgcgcccaagacagacctcatggccttcagtccaagcctt
cagctgtctcgagaagattgtttaagtcctcccagtgaaccacgacagcccaaccctgac
tggcgttactctgcctccctgagagcaggcatgcacagctctgtgcacctagaggaggct
ggcattctacgggctggtccaggagggcctgatcaacagtggccaacagtatccagtgca
acaccagaaccagaggcaggagaagtgtcccctccggttggtgcgggtgtcaatagcaac
agctggacctttaaatacggaccaggcaaccccaaacaatccggtcccggtgagttgcca
gacaaattcattatcccaggatctcctgcaatcatctccatccggcaggagcccactaac
agccaaattgacaaaagtgacttcataaccttcggcaaaaaggaggagaccaagaaaaag
aagaaaaagaagaagggtaacaagacccaggagaaaaaagagaaagggaacagcacgact
gacaacagtgaccagtga
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