Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101054049
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Entry
101054049 CDS
T04350
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbq04515
]
101054049 (PCDH18)
Cell adhesion molecules [BR:
sbq04515
]
Cadherins
Protocadherins
101054049 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PAH
BBS1
TMEM154
Syndecan
Cadherin_C_2
MPS-4
DUF3418
Motif
Other DBs
NCBI-GeneID:
101054049
NCBI-ProteinID:
XP_003943102
UniProt:
A0A2K6TDT0
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MRQMNAKMHFRVVFALLMVSFNHEVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLPN
PSTVRFRAMQRGNSPLLVVNEDTGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSDND
FFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSN
DNSPVFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKID
SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLMS
PGKEEISYIFEGDPIDTFVALVRVQDRDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNSP
GAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQ
ITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFHV
TRIRAIDRDSGVNAELSCSIVAGNEENIFIIDPRSCDIHTNVSMDSVSYTEWELSVIIQD
KGNPQLHTKVLLKCMIFEYTESVTSTAMTSVSPPPLDVSMIIIISLGAICAVLLIIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPS
SSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ
QHPHQSLEDDAQPADSGEKKKSFSTFGKDSPSDEDSGDTSTSSLLSEMSSVFQRLLPASL
DTYSECSEMDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTNNCGPPLGTHSSVQ
PSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagatgaatgctaaaatgcactttagggttgtttttgcactcctgatggtatct
ttcaaccacgaggtactgggcaagaatttgaaatacaggatttatgaggaacagagggtt
ggatcagtcattgcgagactatcagaggatgtggctgatgttttattgaagctacctaat
ccttctactgttcgatttcgagccatgcagaggggaaattctcctctacttgtagtgaat
gaggatactggggagatcagcataggggctacaattgaccgtgaacaactatgccagaaa
aacttgaactgttccatagagtttgatgtgatcactctacccacagagcatctgcagctt
ttccatattgaagtcgaagtgctggatatcaatgacaattctccccagttttcaagatct
ctcatacctattgagatatctgagagtgcagcagtagggactcgcattcccctggacagt
gcatttgatccagatgttggggaaaattccctccacacctactcgctctctgacaatgat
ttttttaatatcgaggttcggaccagaacggatggagccaagtatgcagaactcatagtg
gtcagagagttagatcgggagctgaagtcaagctacgagcttcagctcactgcctcagac
atgggagtacctcagaggtctggctcatccatactaaaaataagcatttcggactccaat
gacaacagccctgtttttgagcagcaatcttatataatacaactcttagaaaactccccg
gttggcactttgctcttagatctgaatgccactgatccagatgagggcgctaatgggaaa
attgtatattccttcagcagtcatgtgtctcccaaaatcatggagactttcaaaattgat
tccgaaagaggacatttgactcttttcaagcaagtggattatgaaatcaccaaatcctat
gagattgatgttcaggctcaagatttaggtccaaattcaatcccagctcattgcaaaatt
ataattaaggttgtggatgttaatgacaataaaccggaaattaacatcaacctcatgtcc
cctggaaaagaagaaatatcttatatttttgaaggggatcctattgatacatttgttgct
ttggtcagggttcaggacagggattctgggctgaatggagaaatagtttgtaagcttcat
ggacatggtcattttaaacttcagaagacgtatgaaaacaattatttaatcttgactaat
gccacgctggatagagaaaagagatctgaatatagtttgactgtaatcgcagaggacaag
gggacaccaagtctctctacagtaaaacattttactgttcaaatcaatgatatcaatgac
aatccaccccacttccagagaagccgatatgaatttgtaatttcagaaaataactcacca
ggggcatatatcaccactgttacagccacagatcctgatcttggagaaaatgggcaagtg
acatacaccatcttggagagttttatcctaggaagttccataactacatatgtaaccatt
gacccatctaacggagccatctatgctctcagaatctttgatcatgaagaagtgagtcag
atcacttttgtggtcgaagcgagagatggaggaagcccgaagcaattggtaagcaatacc
acagttgtgctcactatcattgatgaaaatgacaatgttcctgtagttatagggcctgca
ctgcgtaataatacagcagaaatcaccattcccaaaggggctgaaagtggctttcatgtc
acaagaataagggcaattgacagagactctggtgtgaatgctgaactcagctgctccata
gtggcaggtaatgaggagaatatcttcataattgatccacgatcatgtgacatccatacc
aacgtgagcatggattctgtttcctacacagaatgggagctctcggttatcattcaggac
aaaggcaatcctcagctacataccaaagtccttctgaagtgcatgatctttgaatataca
gagtcagtgacaagtacagcaatgacttcagtaagcccgccacccttggatgtctccatg
ataataattatttccttgggagcaatttgtgcagttttgttgattattatggtgctattt
gcaactaggtgtaaccgtgagaaaaaagacactagatcctataactgcagggtggcggag
tcaacttaccagcaccacccaaaaaggccatctcggcagattcacaaaggggacatcaca
ttggtgcctaccatcaatgggactctgcccatcagatctcatcacagatcatctccgtca
tcatctcctaccttagaaagagggcagatgggcagccggcagagtcacaacagtcaccag
tcactcaacagcttggtgacaatctcatcaaaccacgtgccagagaatttctccttagaa
ctcacccacgccactcctgctgttgagcaggtctctcagcttctttcaatgcttcaccag
gggcaatatcagccaagaccaagttttcgaggaaacaaatattccaggagctatagatat
gcccttcaagacatggacaaatttagcttgaaagacagtggccgtggggacagtgaggca
ggagacagtgattatgatttggggcgagattctccaatagataggctgctgggtgaagga
ttcagcgacctgtttcttacagatggaagaattccagcagctatgagactctgcacggag
gagtgcagggtcctgggacactctgaccagtgctggatgccaccgctgccctcaccgtct
tctgattacaggagtaacatgttcattccgggagaagaattcccagcacaaccccagcag
cagcatccacatcagagtcttgaggatgacgctcagcctgcagattccggtgagaagaag
aagagtttttccacctttgggaaggactccccaagcgacgaggactctggggataccagc
acatcatctctgctctcggaaatgagcagtgtgttccagcgcctcttacccgcttccctg
gacacctattctgaatgcagtgagatggatcggtccaactccctggaacgcaggaaggga
cccttgccagccaagactgtgggttacccacagggggtagcggcatgggcagccagtaca
cattttcaaaaccccaccaacaactgtgggcccccacttggaactcactccagtgtgcag
ccttcttctaaatggttgccagccatggaggagatccctgaaaattatgaagaagatgat
tttgacaatgtgctcaaccacctcaatgatgggaaacacgaactcatggatgccagtgaa
ctggtggcagaaattaacaaactgcttcaagatgtccgccagagctag
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