Fretibacterium fastidiosum: SY1_06720
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Entry
SY1_06720 CDS
T02602
Name
(GenBank) ribonuclease III, bacterial
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sbr
Fretibacterium fastidiosum
Brite
KEGG Orthology (KO) [BR:
sbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbr03019
]
SY1_06720
03009 Ribosome biogenesis [BR:
sbr03009
]
SY1_06720
03036 Chromosome and associated proteins [BR:
sbr03036
]
SY1_06720
Enzymes [BR:
sbr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SY1_06720
Messenger RNA biogenesis [BR:
sbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SY1_06720
Ribosome biogenesis [BR:
sbr03009
]
Eukaryotic type
90S particles
RNase
SY1_06720
Prokaryotic type
rRNA processing factors
SY1_06720
Chromosome and associated proteins [BR:
sbr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SY1_06720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
CBL28033
UniProt:
D4M838
LinkDB
All DBs
Position
complement(758626..759381)
Genome browser
AA seq
251 aa
AA seq
DB search
MPGSALLRDILDAALSEQERARIEGRDLAALQAALGYSFRDEGLLEEALCHASFANEHGL
AVSNERLEFLGDSVLGFVVARALYRLYPEAREGDLTQKRAELVCGRSLRDRARELNLPPL
ILHGHSVRDEALPTSMCEDAVEALLGAVCLDGGVQAAEGVIGRLFLQEAEVRAETDVSPK
SRLQTWLQARRIPLPTYELVSVTGPSHAPSFRVRLRVNGVEHTACGSTRKGAESDAAERV
LEDLMSLEVGE
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgccggggagcgcgctcctgagggatatccttgacgccgccctctccgagcaggaaagg
gcgcgcatagaggggcgcgacctcgcggcgctgcaggccgccctggggtactcctttcgc
gacgaggggctcctggaggaagcgctgtgccacgcctccttcgccaacgagcacgggctg
gccgtcagcaacgagcggctggagttcctgggggactccgtgctgggctttgtcgtggcc
cgcgccctctaccggctctatccggaggccagggaaggcgacctgacgcagaagcgcgcg
gaactcgtctgcggccgctcccttcgggaccgcgcgcgggagctgaaccttccgcccctg
atcctgcacggacactccgtgagggacgaggcgcttcccacctcgatgtgcgaggacgcg
gtggaggcccttctgggcgcggtctgcctggacggcggcgtgcaggcggcggagggcgtg
atcggacggctgttcctgcaggaggcagaggtgcgagccgagacggacgtcagccccaag
tcgaggcttcagacgtggcttcaggcccgcaggatccccctgccgacctacgagctggtc
tccgtcaccggcccctcccacgcgccgtcctttcgcgttcggctcagggtgaacggcgtc
gagcacaccgcctgcggcagcacgcgcaagggcgcggagtccgatgcagcggagcgggta
ctcgaggacctcatgagcctggaggtcggcgaatga
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