Fretibacterium fastidiosum: SY1_08590
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Entry
SY1_08590 CDS
T02602
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sbr
Fretibacterium fastidiosum
Pathway
sbr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sbr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SY1_08590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbr03021
]
SY1_08590
03400 DNA repair and recombination proteins [BR:
sbr03400
]
SY1_08590
Enzymes [BR:
sbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SY1_08590
Transcription machinery [BR:
sbr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SY1_08590
DNA repair and recombination proteins [BR:
sbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SY1_08590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
CBL28150
UniProt:
A0AB94IWK3
LinkDB
All DBs
Position
complement(972242..973243)
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AA seq
333 aa
AA seq
DB search
MLETLEILRPVLKLEENTPTYGRLYLEPLERGYGMTLGNALRRVLLSSIRGAAITSVRID
GVLHEFSTVPGVREDVMEILMNLKHIPVRSKSKEVRVVSLDVERAGLVTAGDIPENGEIE
FIDPNAKICTMEEGAHLSMELYIEQGTGYLSAERPRPAYLPVDALLTDAIFSPVLRVNYG
VEAARVGQRTDFERLAMDVWTNGIIAPDAAVGEAAQIIEKCFSYIVASVGQAGPDGVGGG
AYDIDLGADRRIGPAGNEELLARPVRELELSIRSENCLLRGGVQTIGDLLQKSREDLLKI
RNLGKISLTEIEEKLESAGLKLREKKEKAGKED
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaaccttggagatcttgcgcccggtgcttaagctggaggagaacactccgact
tacgggcgcctgtacctggagcccctggaacgcgggtatggaatgacgttgggaaatgcg
cttcgaagggtgctcctctcttcgatccggggcgctgcgatcacgtcggtgcgcattgac
ggggtgctgcacgagttcagcacggtccctggcgtgcgggaggatgtgatggagatcctg
atgaacctgaagcacatccccgtccgctccaagagcaaggaggttcgcgtggtctccctg
gacgttgagagggcggggctcgtgacggccggagacatcccggagaacggcgagatcgag
tttatcgacccgaacgcgaagatctgcaccatggaggagggggcccacctcagcatggag
ctctacatcgagcaggggacgggctacctctccgccgagcgccccaggccggcctatctc
cccgtggacgcgctgcttacggacgcgatcttctcccccgtgctccgcgtgaactacggc
gtggaggcggcgcgggtcgggcagaggaccgactttgaacggctggcgatggacgtctgg
accaatgggatcatcgccccggacgcggcggtgggcgaggcggcccagatcatcgagaag
tgtttcagctacatcgtggccagcgtcggccaggccgggccggacggcgtcggaggcggc
gcctacgacatcgacctgggcgcggacaggaggatcgggccggcggggaacgaggaactt
cttgccaggccggtccgcgagctggagctctccatacgcagcgagaactgcctgctgcgg
ggtggggtccagacgattggggatcttcttcagaaatcccgcgaggacctcttgaagatc
cgcaacctcggaaagatatctctgaccgagattgaggaaaaactggaaagcgcggggtta
aagctgcgcgagaaaaaggaaaaagcaggtaaggaggattaa
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