Fretibacterium fastidiosum: SY1_08980
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Entry
SY1_08980 CDS
T02602
Name
(GenBank) ABC-type oligopeptide transport system, periplasmic component
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
sbr
Fretibacterium fastidiosum
Pathway
sbr01501
beta-Lactam resistance
sbr02010
ABC transporters
sbr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sbr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SY1_08980
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SY1_08980
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SY1_08980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbr02000
]
SY1_08980
Transporters [BR:
sbr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
SY1_08980
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CBL28179
UniProt:
A0AB94IWS3
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Position
complement(998337..999938)
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AA seq
533 aa
AA seq
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MKGKKWLLALVAVLCLMGTAWAGEREIVYNLGIEPRTIDPVLNSAVDGSTVLYNISEGLV
RIGLDDAPEPGCAESWEVSEDGLSWTFHLREGLKWSDGKPLTAEDFRCGFQRVFNPENAC
PFAYVGYFIKNGEECFKGTAKLEELGVTAVDERTLRLDLKHPSPLMLDYLSYHIFFPARA
DVVEQDPRGWSASGSFPCNGPFMITEWKHNSELTVVKNPHYWDADKVKLDKVRMVMINDV
NTALAAFKGGKVDYNTLVPAPMLPQLLESGEAKARNTLGTYFYVFNTARRPFDDARVRRA
FALAVDRTAIVEKVTRGGQKPANGFIPYGIPGVDPNDPAADFRAEDKAEYLPPRADVEQA
KKLLAEAGYPDGKDFPKVQCKYNSNLGNKAIAEALQAMWRQNLGVEVELYNEEWKVFINT
RNKKDFDIARHGYLVDFFDAGSLLEMWQTGVWENSASFSDAEYDALIRDSLEQMDRAKRI
EDMHKAEQILMREMPVCPLYFYTTPSMQSARVKGIYHSPRNWVFFRGAEVVEP
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaagggaaagaagtggcttcttgcgctggtggccgtactgtgcctgatggggacggcg
tgggccggggagagggagatcgtctacaacctgggtatcgagccgcggacgatcgacccc
gtgctgaacagcgcagtggatggctccacggtgctctataacatcagcgaaggtctggtg
cgcatcggccttgacgacgcgccggagccggggtgcgccgagagctgggaggtctcagag
gacggcctgtcctggacgttccacctgcgggagggcctgaagtggtctgacggcaagccg
ctgacggcggaggacttccgttgcggcttccagcgcgtgttcaacccggagaacgcctgc
cccttcgcctacgtcggctacttcatcaagaacggcgaggagtgcttcaagggcacggcg
aagctggaggagctgggcgtgacggcggttgacgagaggacgctgcgcctggacctgaag
caccccagccccctgatgctggactacctgtcctaccacatcttcttccccgcgcgggct
gacgtggtggagcaggacccccgtggctggtccgcgtcgggctccttcccctgcaacggg
cccttcatgatcacggaatggaagcacaacagcgagctcacggtggtgaagaacccccac
tactgggatgccgacaaggtgaagctggacaaggtccgcatggtcatgatcaacgacgtc
aacacggccctggcggccttcaagggggggaaggtggactacaacacccttgtccctgct
ccaatgctcccgcagctcctggagagcggcgaggccaaggcgcgaaacacgctgggcacg
tacttttacgttttcaacacggcccgcaggccctttgacgacgcgcgcgtgcgcagggcg
tttgctctggccgtcgaccgcacggccatcgtcgagaaggtgacgaggggtggacagaag
ccggccaacggctttattccctacggcatcccgggcgtggaccccaatgacccggcggcg
gacttccgcgctgaggacaaggcagagtacctccccccgcgcgccgacgtggagcaggcg
aagaagctcctggccgaggcgggctatccggacggaaaggacttccccaaggtgcagtgc
aagtacaacagcaacctcgggaacaaagccatcgcggaagcgcttcaggccatgtggagg
cagaacctgggcgttgaggtggaactctataacgaggagtggaaggtgttcatcaacacc
cgtaataagaaggacttcgacatcgcgcgccacggctacctggtggacttcttcgacgcg
ggcagcctcctggagatgtggcagacgggcgtttgggagaattctgccagcttcagcgac
gcggagtatgacgccctgatccgggattcccttgagcagatggaccgcgcgaagcgcatt
gaggacatgcacaaggccgagcagatcctgatgcgcgagatgccggtctgcccgctttac
ttctacacgacgccctccatgcagagcgcccgggtgaagggaatctatcactctccgcgc
aactgggtgttcttccgcggcgctgaggtcgtggagccgtag
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