Fretibacterium fastidiosum: SY1_09530
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Entry
SY1_09530 CDS
T02602
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sbr
Fretibacterium fastidiosum
Brite
KEGG Orthology (KO) [BR:
sbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbr03400
]
SY1_09530
DNA repair and recombination proteins [BR:
sbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SY1_09530
Archaeal homologous recombinant proteins
SY1_09530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_27
AAA_21
T2SSE
ABC_tran
nSTAND3
NTPase_1
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
CBL28206
UniProt:
D4M8L1
LinkDB
All DBs
Position
complement(1057089..1060292)
Genome browser
AA seq
1067 aa
AA seq
DB search
MRPLTLTMRAFGSYNKETTVDFTRPNQKLFLITGDTGAGKTTIFDAIVFALYGETSASGR
SGGRRQGEDLQSQFADLDTEPFVKLTFSEVHGGEKRHYTVTRTPRCHQSLKQKAGSRPKG
ETVSLSMPDGLVYTGNLRETNQKIGEIVGLTKEQFMQVAMIAQGEFMELLCAGADKKKDI
FRKLFRTRLYQDVVDELKRRLDDAAKRVTEIRSAFQAEAGHVVIPEELDGMERLKEIRSR
LLTSEGGTVMDMEALLAELSALCSRLKEGAALAASERYEAGRRRDEARDAYTGAQDLARA
FEELERSERALAECEAEEGRIQEAGRLMIQINAACEIQPLHQRMGDAEKAAAETERKLAD
LKGSLPDLNLDRQRAEASEAEARSVQAAGIEEFTRVSERVSRALQVLERIRATTERFEEW
RAALSAAEMTSLQAKDALMNFEAREAAWRAREKELEGADLRLAHWEVRRREAEDLMVEVS
LAEDAGRDAQRQRAETERLQGEYASVREEYNRKRDEYVRRQEEFLDAQAGFIAWEKLRPG
EPCPVCGSLDHPRPCLLPEGSRDLTREVVDALAEEVASLQQDLTKRSTASGSALSLLEEK
ERTLKGALARLQERLARSVPEASEAPSLDQVRALLESWRAGIRAEGVALQEGAQALSRIK
ESLKSVDEQRQALTIAVDQAVRTAHQAESALAAAEAELRGLEGQRDYATVADAQSALDEA
RVAKRKADSTFEAAREAAQAARSSLENAEAAIARFAEELPLQREEAERRRQAYEALMDEK
KLSEADWMETVRRYGREDVGELLDEVEAHRKKKAAAEGARDAALKAVNGREKPVMEDLER
ARDKAEEELEKARAAWARLDRAFEADDAALCALSPRMEERKQVAREHARLNGLHRGLGGR
ESGARMDIETFVQRHYLQRILHAANTRFQDMTAGQFELRLVQEDQAGEGRNQGLDLVVYS
SVTGRERRVWTLSGGESFVAALSLALGMADLIQESASSISLDMIFIDEGFGSLDDRTRNQ
AVRVLQRIAGSRLIGIISHVTELKQEIEDQLIVSKDSEGSRVRWQIS
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgctgacactcaccatgagggcgtttggctcctacaacaaggagacgacggtg
gacttcacccggccgaaccaaaagctcttcctcatcaccggggacaccggcgcgggcaag
accacgatctttgacgccatcgtcttcgccctctacggggaaacgagcgcaagcggcagg
agcgggggcaggcggcagggcgaggacctgcagagtcagttcgcggacctggataccgag
cccttcgtgaagttgaccttctcggaggtccacggtggagagaagaggcactacaccgtg
acccgcacccctcgctgccaccagtcgctgaaacagaaggccggctccaggcccaagggg
gagaccgtctccctctcgatgccggacggcctggtgtacaccgggaatctgcgggagacg
aaccagaagatcggagagatcgtcgggctgacgaaggagcagttcatgcaggtggccatg
atcgcccagggggagttcatggagctgctctgcgctggagcggacaagaagaaggacatc
tttcggaagctcttccgcacccggctctatcaggacgtcgtggatgagttgaaacgccgg
ttggacgatgcggccaaacgggtgacggagatccgcagcgcctttcaggccgaggcggga
cacgtcgtgatcccggaggagctcgatggcatggagcggctgaaggagatacgctctcgc
ctcctgacctccgagggagggacggtcatggacatggaggcccttctggcggagctcagc
gccctctgcagcaggctcaaggaaggagctgccctcgctgcgtcggagcggtacgaggcg
ggcaggcggcgggacgaggcgcgcgacgcctacaccggggctcaggacctcgcacgggcc
tttgaggagctggagaggtcggagagggcgcttgccgaatgtgaggccgaggaggggcga
attcaggaggcaggccgcttgatgatccagatcaacgctgcctgcgagattcagcccctg
catcagaggatgggcgacgcggagaaggccgcggcggagacggagagaaagctggcggat
ttgaaggggtcccttccggacctcaacctggaccgccagcgggcggaggcctccgaggca
gaggcccggtccgtccaggcggcggggatcgaggagttcacgcgagtgtccgagcgcgtg
agcagggcgcttcaagtgctggagcggatccgcgccacaacggagaggttcgaggagtgg
cgcgctgcgctcagcgcggcggagatgacctcgctccaggccaaagacgctctgatgaat
ttcgaggccagggaagcggcgtggcgggcgcgggagaaggagctggagggtgcggacctg
cgcctggcgcactgggaggtccgacgaagggaggcggaggacctcatggtggaggtgtcc
ctggcggaggacgccggacgggacgcccaacggcagagggcggagacggagcggctgcag
ggggagtatgcctccgtcagggaggagtacaaccgcaagagggacgagtacgtccgaaga
caggaggagttcctggacgcccaggccgggttcatcgcctgggaaaagctgaggccgggc
gagccctgtcccgtgtgcggctccctggatcacccgcgcccctgcctgctgccggagggc
agccgggatttgacccgggaggtcgtcgatgcgctggccgaggaggtcgcgagcctgcag
caggacctgacgaagcgctccacggcgtcgggctccgccctgagcctcctggaggagaag
gaaaggaccttgaagggggccttggcacgcctgcaggagcgcctggcaaggagcgttccg
gaggcgtcggaagcgccgagcctggatcaggtgcgggcgctgttggaaagctggagggcc
gggatccgggcggaaggggttgcgcttcaggagggcgcgcaggctttgagccgcatcaag
gagtccctgaagagcgtggacgaacagcggcaggcactgacgatcgccgtcgatcaggcg
gttcggacggctcatcaggcggagagcgccctcgccgccgccgaggcggagctcaggggc
ctcgaagggcagcgggactacgcgaccgtggcggacgcgcagtcggccctcgacgaggcc
agggtcgcgaagcggaaggcggactcgaccttcgaggccgctcgcgaggcggcgcaggcg
gcgcggagctcgctggagaacgcggaggctgcgatcgcccggttcgcggaggaactgccc
cttcagagggaggaggcggagcggcgcagacaggcctacgaggcgctcatggacgagaag
aagctgtccgaggcggattggatggagaccgttcgccggtacggtcgggaagacgtgggc
gagctgctggatgaggtggaggcgcaccgcaagaaaaaggcggctgcggagggcgcgcgc
gacgcggccctgaaggccgtgaacggacgtgagaagcccgtcatggaagacctggaaaga
gccagggacaaggcggaagaggaactggaaaaggcccgggccgcctgggcgcgactcgac
agggcctttgaggcggacgacgccgccctctgcgccctgtcgccgaggatggaggagcgg
aagcaagttgcgcgggagcacgcccggctcaacgggctgcaccgggggctggggggcagg
gagtcgggtgcccgcatggacattgagaccttcgtgcagcggcactacctgcagcgaatc
ctgcacgcggcgaacacccgctttcaggacatgaccgcggggcagttcgagctccgcctg
gtgcaggaggaccaggcgggggaggggaggaatcaggggctggacctcgtggtctattcc
tccgtcaccggcagggaacggagggtctggacgctctccggcggcgagtccttcgtggcg
gccctctcgctggctctggggatggcggacctgatccaggagagcgcctcgtcgatcagc
ctggatatgatcttcatcgacgagggcttcggctccctggacgaccgaacgcgaaatcag
gcggtcagggtgttgcagcggatagcgggcagccgcctcatcggcatcatctcccacgtg
acggagctgaagcaggagatcgaggaccagctgatcgtcagcaaggactcggagggcagt
cgggtccgttggcagatcagctga
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