Fretibacterium fastidiosum: SY1_11220
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Entry
SY1_11220 CDS
T02602
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sbr
Fretibacterium fastidiosum
Pathway
sbr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SY1_11220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbr03400
]
SY1_11220
Enzymes [BR:
sbr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SY1_11220
DNA repair and recombination proteins [BR:
sbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SY1_11220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Matrilin_ccoil
ApoM
Motif
Other DBs
NCBI-ProteinID:
CBL28305
UniProt:
A0AB94IX01
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All DBs
Position
1232488..1233111
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AA seq
207 aa
AA seq
DB search
MDDKERDAAWEAAWEDLRGRVAACRRCGLCEARTNTVFGQGAVRTPIVMVGEGPGADEDA
QGLAFVGRAGQLLTKILSAAGIDRESVFITNVVKCRPPNNRTPTQEEMLKCADFLEAQLL
LLRPRILVCLGNTPLKWLLRTSEGITALRGRWFDWRGVQLFPMFHPSYLLRNDSRQKGSP
KDLTWQDVQNLKARLDEITKRKGTEAN
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaaggagcgggacgcggcgtgggaggccgcatgggaagacctgcggggccgc
gtggccgcctgcaggcgctgcggcctgtgcgaggcgcggacgaacacggtctttggccag
ggggcggtccgcacccccatcgtgatggtgggcgaggggcccggcgccgacgaggacgct
caggggctggccttcgtgggacgggcgggccagcttttgacgaagatcctgagcgccgcg
gggatcgaccgggagtccgtgttcatcacgaacgtcgtgaagtgccgtccccccaacaac
cgcaccccaactcaggaggagatgctgaagtgcgcggacttcctggaggcccagctcctg
ctgctgaggccccggattttggtgtgcctggggaacacgccgctgaagtggctccttcgg
acgtcggagggcatcacggctctgcggggccgctggttcgattggcggggcgttcagctc
ttcccgatgttccatccgagctacctgctgcgcaacgactcgcggcaaaaggggagcccc
aaggacctgacgtggcaggacgtgcagaacctcaaggcgcgcctggacgagatcacaaag
aggaaaggaacggaggccaattga
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