Fretibacterium fastidiosum: SY1_19120
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Entry
SY1_19120 CDS
T02602
Name
(GenBank) Sigma-54 interaction domain.
Organism
sbr
Fretibacterium fastidiosum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_5
AAA
AAA_2
Mg_chelatase
AAA_3
MCM
Sigma54_activ_2
AAA_16
AAA_22
AAA_29
Zeta_toxin
AAA_14
TniB
AAA_24
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CBL28750
UniProt:
D4MA55
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All DBs
Position
2109829..2111109
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AA seq
426 aa
AA seq
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MTNKKLTERSIGIYLHFDRKKTEYKECMEILKKAFESLSTSGKEELREPGYDFVPNIESA
FFVIASPKTLKNCKPLDKGPMPTILLLQDDEWNDDTADVLADPQWDVRGLFRLSRLGEKW
DYEEFGDLASAVKELARESMRQGGGAEESFRKPVDWKAKLTAQHRVGFVSLFSDPSTRTM
ARQFKNALGDIGKRLPLTPNTRPPSLLLLGETGCGKSLLARAAADVLFPGAENRFKRLNI
SAYTNDLIDIELFGSKKGAYTGCDEDRPGVFVAAQGGVVFLDEIGDMEPRNQTRLLTYMD
DGNVLPRGTTEKVSAPCVVIAATNRRIDRGEGDFREDLFCRFDHVITIPPLRERKRDLRL
LVSLTLQDEEVNPDRKVRFISLDAIEYIERRNFPGNFRELRFLLRQSVRRAVASASECLC
LRHFAD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataaaaaattgacagagcgaagcattggcatctacctgcatttcgacagaaaa
aagacagaatataaggaatgcatggagattctgaagaaggccttcgagagcctgagcacc
tcaggcaaggaagaactcagggaaccaggctacgactttgttcccaacattgaatccgcg
ttcttcgtcatcgcgtccccgaaaacgctgaaaaactgcaagcctctggataaaggtccc
atgccgacaatcctgctgctgcaggacgacgaatggaatgacgacacggcggatgtcctc
gcagatccccaatgggatgtgcgagggctcttccgtctgtcaaggctcggagaaaagtgg
gattatgaggaattcggcgatctcgcttccgccgtcaaggaactcgcccgcgaatccatg
cggcaggggggaggtgcggaggaaagcttccgcaagcctgtagactggaaggcaaagctc
acggcccaacatcgggtcgggttcgtcagccttttctcggacccctcgacgcggacgatg
gcccgtcaatttaagaacgccctcggtgacatcggaaaacgactgcctctgacgccgaat
acgcgtcccccatctctgctgcttcttggagagacgggctgcggcaagtctcttttggcg
cgcgctgcggcagacgtcctgttccccggtgcggagaatcgctttaagcgtttgaacatc
tcggcctatacgaacgacctgatcgacatcgagctcttcggctccaaaaagggggcctat
acgggatgcgacgaggaccgtcctggggtcttcgtcgcagctcaaggcggggtggtcttt
ctggacgagatcggggacatggaaccccgcaaccaaacacggctcctgacctacatggat
gacggcaacgtgctcccgcgcgggaccacagagaaggtaagcgctccctgcgtcgtcatt
gcagcgaccaacaggaggatcgacaggggagagggggattttcgcgaggacctgttctgc
cgattcgatcacgtcatcacgatccctccccttcgggagcgaaaaagggacttgcggctg
cttgtcagtctgacgttgcaggacgaggaggtcaaccccgacaggaaggtccgttttatc
agcctcgacgccattgaatatatcgagcgccgcaattttccgggaaacttccgggagctt
cgcttcctgctccggcagtcggtccggcgcgccgtcgcctccgcgtcggaatgcctgtgc
ctcaggcacttcgcggactga
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