KEGG   Fretibacterium fastidiosum: SY1_19310
Entry
SY1_19310         CDS       T02602                                 
Name
(GenBank) Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
sbr  Fretibacterium fastidiosum
Brite
KEGG Orthology (KO) [BR:sbr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sbr02048]
    SY1_19310
Enzymes [BR:sbr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SY1_19310
Prokaryotic defense system [BR:sbr02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SY1_19310
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DUF4145 DEAD HSDR_N Helicase_C SNF2-rel_dom HSDR_N_2 AAA_19
Other DBs
NCBI-ProteinID: CBL28764
UniProt: A0AB94IYM1
LinkDB
Position
2133838..2137134
AA seq 1098 aa
MTNFDLFARVQDFASFTEPAVSAERIYRIDTAACVLNCRRAMEAAVKWMYSVDRALAMPY
QDNLVSLISTDEFRDIVDDSLLRRMDFIRKTGNAAAHAGRKITREQAALCLENLFIFLDF
VAYCYAEDYREGTFDPSLLEQEAPAAAPVIDTETERKLEELIQENAALREELTARRAEQQ
QTYVPKPLDISEYKTRKLYIDAMLEDAGWTKGRNWFDEYEISGVPNKSETGYADYVLTGD
DGGILAVIEAKRTCVDVAKGRQQAKLYADLIEQKQGRRPVVFLTNGFDTRIVDNQYPERQ
VAAFHSKRDLEKLFNLQRMRSGLKNIVVDKAIADRYYQEAAIKAVCDSFGQKNRRKALLV
MATGSGKTRTVIALVKVLLEQGWIKNVLFLADRNSLVTQARRSFVNLLPDLSVTNLCEEK
DNYAAHGVFSTYQTMMNCIDSVRDEEGKLFSCGHFDLVICDEAHRSIYNKYKDIFNYFDA
PLVGLTATPKDEIDKNTYAVFELESGVPTYGYELAQAVQDGYLVDFLSVETKLKFIQEGI
VYDDLSDEDKETYENTFEDENGELPESIASSALNEWIFNEDTIREALYILMTHGLKIDYG
NKMGKTILFAKNHTHAENILEGFEKEYPHLNGCARVIDNYMTYAQSAIDEFSDPKKLPQI
AISVDMLDTGIDVPEVLNLVFFKKVMSKAKFWQMIGRGTRRCPGLIDGVDKGKFYIFDFC
GNFEFFRMSKGKPTANRIALQGAIFGLQFEIAYKLQDLQYQTERLIAYRSALVEHMTGKV
RELNRENFAVRQHLRYVDRYAVSENYQALTYEDTLVVREELAPLIEPEDDDPKALRFDAL
MYGIELAYLAGKKYNRARHDLLQKVAAVASVANIPEIMMQAELIDKVLHTDYLDHAGIDE
FEHIRKGLRDLMKYIPVGKIIYDTDFDDEILSVDWKESELENDDLKNYKAKAEYFVRQHQ
DHEVIAKLKSNVPLTGADVKVLEEILWSEVGTKQEYEAEYGTKPLGEFVREIVGLDMNAA
KAAFAEFLNDTNLDGRQIYFVNQIVEYIVHNGMMKDLSVLQDTPFTDQGSIVEVFTDLTV
WKGIRRVIEQVNANALAA
NT seq 3297 nt   +upstreamnt  +downstreamnt
atgaccaactttgacctctttgcaagagtacaggatttcgcctcctttacggagcctgcc
gtatcggcggagcgcatctatcggatcgatacggcagcctgcgtgttgaattgccgcagg
gcgatggaggctgccgtcaaatggatgtattccgtggaccgtgcgctggcaatgccgtac
caggacaatctcgtcagcctcatcagcacggatgagttccgggatatcgtggacgacagc
ctgctgcgccggatggacttcatccgtaagaccggaaacgccgcagcccatgccggacga
aagatcacaagggaacaggctgcgctatgtctggaaaacctgttcatctttctggatttc
gtggcttactgctatgcggaggattatcgggaaggaaccttcgatccttccctgttggag
caggaagcccctgccgccgcgccggtcatcgatacggaaacggaacggaagctggaagag
ctcattcaggagaatgcggcgctgcgggaggaactgaccgcccgccgcgccgagcagcag
caaacctacgtgcccaagccattggacatttctgagtataagacccgaaagctctatatc
gatgccatgctggaggacgccggttggaccaaaggcaggaactggttcgacgaatatgaa
atctccggcgtacccaacaagtccgagacaggctatgccgattatgtgctgacgggcgat
gacggggggatccttgcggtgatcgaggcaaagcgcacctgcgtcgatgtggcaaaaggc
cgtcaacaggcaaagctgtatgcggacctgatcgagcagaagcagggccgccggccggtg
gtgttcctgaccaacggtttcgacacccggatcgtggataatcagtatccggagcgacag
gtcgcggccttccattccaaacgggacctggagaagctgttcaacctccagcgcatgcgc
tccggcctgaagaacatcgtcgtggacaaggccatcgcggaccgctattatcaggaagct
gccatcaaggcggtgtgtgacagcttcgggcagaagaaccgccgcaaggcgctgttggtc
atggccacgggctcaggcaagacgcggaccgtcattgcgctggtcaaggtgctgctggaa
cagggctggatcaagaacgtcctgttcctggcagaccgcaattccctggtcacccaggcc
aggcggagcttcgtgaacctcctgccggatctgtccgttacgaacctctgcgaggagaag
gacaactatgccgcgcacggtgtgttctccacctatcagacgatgatgaactgcatcgat
tccgtgcgggacgaggagggcaagctgttctcctgcgggcatttcgatctggtgatctgc
gacgaggcacaccggtcgatttataacaagtataaagacatcttcaactatttcgatgct
ccactggtgggcctgaccgccacgccgaaggacgagatcgacaaaaacacctatgccgtt
ttcgagctggaaagtggcgtaccgacctatggctatgagctggcacaggcagtgcaggac
ggatatctggtggatttcctgtccgtggaaacgaaactgaaattcatccaggagggcatc
gtctacgacgatctgtccgatgaagataaggaaacctatgagaatacctttgaggatgaa
aacggcgagttgcctgaaagcatcgcgtcgtctgcattgaacgaatggatattcaacgag
gatacgattcgcgaggccctgtatatcctcatgactcacggcctgaaaatcgactatggc
aacaaaatgggcaagaccatcctttttgccaagaatcatacccatgcggaaaatatcctg
gaggggtttgagaaggagtatccgcacctgaacggttgtgccagggtcatcgacaattat
atgacctacgcccagagcgccatcgacgaattctccgacccgaagaagctgccgcagatc
gccatttccgtggacatgttggacaccggcatcgacgtgccggaggtgttgaacctggtc
ttcttcaagaaggtcatgagcaaggccaagttctggcagatgatcggacgcggcacacgc
cgttgccccggactgatcgatggcgtcgataaaggcaagttctacatctttgatttctgc
ggcaactttgagttcttccgcatgagcaaagggaagcctacggcgaacaggatcgccctc
cagggtgcgattttcgggcttcagtttgagattgcctataagcttcaggacctgcaatat
cagacggaacggctgatcgcctatcgtagtgcgttggtggagcatatgaccggaaaagtc
cgggaactgaaccgggaaaactttgcggtccggcagcatctaaggtacgtggatcgatac
gccgtctcggagaattatcaagcgctgacctacgaggatacgcttgtggtgcgggaagag
ctggctccgctgatcgagccggaagacgacgacccgaaggcgctccgcttcgatgccctg
atgtacgggattgagctggcctatctggcgggaaagaaatacaaccgcgccagacacgat
ctgctgcagaaggttgcggccgtggccagcgtggccaatattccggaaatcatgatgcag
gcggagctgatcgacaaggtccttcacacggattatctggaccatgccggtatcgacgaa
tttgaacatatccgaaagggcctgcgcgacctgatgaagtatattcctgtcggcaaaatc
atttacgacacggatttcgatgacgagattctttcggttgactggaaagaatccgaactg
gaaaatgatgacctgaagaactacaaagccaaggccgagtattttgtccgtcagcatcag
gatcatgaagtgatcgccaagctgaagagcaatgtaccgctgaccggagcggacgtgaag
gtgctggaggaaattctctggagcgaggtcggtacgaagcaggagtatgaggcggagtat
ggaaccaagcctttgggcgagttcgtgcgggaaattgtcggcctcgacatgaacgcagcc
aaggctgcctttgccgagtttttgaacgacacgaaccttgatggccgacaaatctatttc
gtcaatcagatcgtagaatacatcgtccacaatgggatgatgaaggatttatcggtgttg
caggatactccgtttaccgatcagggcagcatcgtagaagtcttcacggacctgacggtc
tggaagggcatccggagggtcatcgagcaggtcaacgcaaatgcgttggcagcctga

DBGET integrated database retrieval system