KEGG   Fretibacterium fastidiosum: SY1_19560
Entry
SY1_19560         CDS       T02602                                 
Name
(GenBank) bacterial nucleoid protein Hbs
  KO
K03530  DNA-binding protein HU-beta
Organism
sbr  Fretibacterium fastidiosum
Brite
KEGG Orthology (KO) [BR:sbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbr03032]
    SY1_19560
   03036 Chromosome and associated proteins [BR:sbr03036]
    SY1_19560
   03400 DNA repair and recombination proteins [BR:sbr03400]
    SY1_19560
DNA replication proteins [BR:sbr03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SY1_19560
Chromosome and associated proteins [BR:sbr03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SY1_19560
DNA repair and recombination proteins [BR:sbr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SY1_19560
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_euk_1 HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: CBL28783
UniProt: A0AB94IY73
LinkDB
Position
2165246..2165548
AA seq 100 aa
MTKAELIDAIAEKLLLKKKDVVPVVEEVFASIEGALSRGEKCTFVGFGVFEVKERAAREG
RNPQDPTKVVKIPAKKVPVFRPGKDLKEKVLAIKGKKKAK
NT seq 303 nt   +upstreamnt  +downstreamnt
atgaccaaagcggaacttattgatgcgattgcggagaagcttcttctgaagaagaaggac
gtcgtccccgtcgtggaggaagtgtttgcttccatcgaaggcgctctttccagaggtgag
aagtgcaccttcgtggggtttggcgtcttcgaggtgaaggagcgcgcggcgcgcgagggc
cgcaaccctcaggatcccaccaaggtcgtcaagatccccgccaagaaggtgcccgtcttc
cgccccggcaaggatctcaaggagaaagttcttgcaatcaagggcaagaaaaaggcgaag
tag

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