Fretibacterium fastidiosum: SY1_22470
Help
Entry
SY1_22470 CDS
T02602
Name
(GenBank) SpoIID/LytB domain
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
sbr
Fretibacterium fastidiosum
Brite
KEGG Orthology (KO) [BR:
sbr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbr01011
]
SY1_22470
Enzymes [BR:
sbr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SY1_22470
Peptidoglycan biosynthesis and degradation proteins [BR:
sbr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SY1_22470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
CBL28939
UniProt:
A0AB94IZ05
LinkDB
All DBs
Position
complement(2484144..2485619)
Genome browser
AA seq
491 aa
AA seq
DB search
MTGYAARGGGRVPPGILRLWGLLALLLLAPLATGAEARDIYVRLSAAGSYTVASDGAMTL
VDGGGKAYPLGNPAALRVSGGRLLSGKTAFALPVRITGGGLMRFNNRRYRGAFLITSRGL
LNVLDLEDYLRGVLPAEVGASWPMEALRVQAIISRTYALRQSMARSSRGYDVTDTVADQV
YRGAGVETAATNQAVASTEREILTYGSDLAFTPFHSDSGGHTANNADVWGRALPYLAGVP
EPVAYASPNASWSVRIPRGSIEAALARIKAGVGALSEVRVARVDKGGRATALTFTGSRGT
SSVRASQFRTAIGPNLLKSTMLTSRAGTPPVAPQQQPKTPQESRPAPVDGRPLPPVPTSR
DPMTFAQEKRLAQMTADGVFTTSELVDMLSNPNKKKGYFYIGLQRTGGSAPAPQPARKPV
PVVPAAPVAPVTGAGGFTVAREGDVFVFCGRGWGHGVGLSQWGSLTLAKNGWKGERILMH
YYPGTEVKRYR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaccggatacgctgcgcggggagggggcagggtgccgccaggaatcctgcggctgtgg
ggccttctggccctgctgcttctggcgccgcttgcgacgggggcggaggcgcgggatatc
tacgtccgcctctccgccgcggggagctacaccgtggcctcggacggggcgatgacgctg
gtggacggcgggggcaaggcctatccgctggggaaccccgcggccctgcgagtctccggc
ggacgcctcctgtcggggaagacggcctttgcgctgccggtccggatcaccggcggcggg
ctcatgcgcttcaacaaccggcgttatcgcggcgccttcctgatcacgagccggggcctc
ctgaacgtcctggacctggaggactacctgcggggggtgctgcccgccgaggtgggggcc
tcctggcccatggaggcgctgagggtgcaggcgatcatctcccgaacctacgcgctgcgg
cagagcatggcccgctccagccggggctatgacgtcaccgacaccgtcgccgaccaggtc
tacaggggagcgggggttgagacggccgcgaccaatcaggcggtggccagcacggagcgc
gagatattgacctacggaagcgatctggccttcacgcccttccactccgacagcggcgga
cacacggcgaacaacgccgacgtctggggaagggccttgccctaccttgccggcgtcccg
gagcccgtcgcctatgcctcgcccaacgcctcctggtcggtcaggataccgaggggcagc
atcgaggccgccctggcgaggatcaaggccggcgtcggggctctctcggaggtgcgggtc
gcccgcgtcgataagggggggcgggctacggcgctgaccttcaccggcagccgcgggacg
agttcggtaagggccagccagtttcggacggccataggcccgaacctcctgaagagcacc
atgctgacgtcaagggcggggaccccgcccgtcgcgccgcagcagcagccaaagacgcct
caggaaagccgccccgcgcccgtggacggacggccgctcccccccgtccccacatcgagg
gaccccatgaccttcgctcaggaaaagcgcctggcgcagatgacggcggacggcgtcttc
acgacgtcggagttggtggacatgctctccaacccgaacaagaagaagggctacttctac
atcggcctccagcggacgggcggcagcgcgccggccccgcagcccgcgcggaagcccgtg
cccgtcgtgcccgctgcgcctgtcgcgcctgtcacgggggctggcggctttaccgtcgcg
cgggagggggacgtcttcgtcttctgcggcagggggtgggggcacggcgtggggctttcc
cagtgggggagcctgacgctggccaagaacggctggaagggcgaacgcatcctgatgcac
tactatccggggacggaggtcaaacgctaccgatga
DBGET
integrated database retrieval system
