Fretibacterium fastidiosum: SY1_22480
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Entry
SY1_22480 CDS
T02602
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sbr
Fretibacterium fastidiosum
Pathway
sbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SY1_22480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbr03400
]
SY1_22480
Enzymes [BR:
sbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SY1_22480
DNA repair and recombination proteins [BR:
sbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SY1_22480
RecFOR pathway proteins
SY1_22480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
RNA_helicase
TIP49
AAA_14
nSTAND3
NTPase_1
AAA_3
DUF815
NB-ARC
AAA_28
AAA_17
AAA_18
Parvo_NS1
Sigma54_activ_2
Rad17
AAA_PrkA
NACHT
TsaE
ABC_tran
AAA_33
AAA_24
DUF3673
IstB_IS21
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
CBL28940
UniProt:
A0AB94IZ00
LinkDB
All DBs
Position
complement(2485616..2486692)
Genome browser
AA seq
358 aa
AA seq
DB search
MSEDARTPIGAEDEGRFFSSPRAAEDATVRPRALADFIGQERVREKLRIYIDAARGRGEP
LDHVLFYGPPGLGKTTLAEIIAQEMGGQLRKTTGPALERAGDLAAIVSNLEANDVLFIDE
IHSMPRQVEEILYPAMEDFELHIVVGKGPLAKTIGLALPRFTLCGATTRLGLLTSPLRAR
FGIVEQLSLYTEQELARIVLRAAGVLGIRIAGDAAIEIARRARGTPRVVLKLLRRVRDVA
SVKGTGEIDADIADRAMNMLDIDAEGMDEGDRQILRAVVERFDGGPVGLGTIAAAINEEP
QTIEDIYEPYLIQKGFLERTPRGRRATSNAYAYLGCPMRRRPDEELRLPFGAEQEEDQ
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggacgcgagaacccccatcggggcggaggacgaggggcgttttttctcctct
ccgcgcgctgcggaggacgccaccgtccgcccgcgcgctctggcggacttcatcggtcag
gagagggtgcgcgagaagctgcgcatctatatcgacgcggcccggggccggggcgagccc
ctggatcacgtcctcttctacggccctcccggtctgggcaagaccacgctggcggagatc
atcgcccaggagatgggagggcagcttcgcaagacgacgggcccggccctggagcgggcg
ggggacctcgccgccatcgtctccaacctcgaggccaacgacgtcctcttcatcgacgag
atccacagtatgccgcgccaggtggaggagatcctctaccccgccatggaggattttgag
ctgcacatcgtcgtcggcaagggccccctggccaagaccatcggcctcgccctgccgcgc
ttcacgctctgcggggccaccacgcggctgggccttctgacctcgcccctgagggcgcgg
ttcggcatcgtggagcagctctcgctctacacggagcaggagctggcccgcatcgtcctg
cgggccgccggggtgctgggcatacgcatcgcgggggatgccgcgatcgagatcgcccgc
cgggcgcgggggacgccgcgggtggtgctgaagctcctgcggcgggtccgcgacgtggct
tccgtcaaagggacgggagagatcgatgcggacatcgcggaccgggccatgaacatgctg
gacatcgacgcggagggcatggacgagggggaccgccagatactgagagcggtcgtcgag
cgctttgacggcggccccgtagggctggggaccattgcggcggccatcaatgaggaacct
cagaccatcgaggatatctacgagccctacttgatccagaaggggttccttgagaggacg
ccgcgagggcggcgggccacgtccaacgcctacgcctaccttgggtgtcccatgaggcgg
cggccggacgaggaactgcgccttcccttcggggcggaacaggaggaggaccaatga
DBGET
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