Streptomyces broussonetiae: GQF42_06555
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Entry
GQF42_06555 CDS
T07359
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sbro
Streptomyces broussonetiae
Pathway
sbro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GQF42_06555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbro03021
]
GQF42_06555
03019 Messenger RNA biogenesis [BR:
sbro03019
]
GQF42_06555
Transcription machinery [BR:
sbro03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GQF42_06555
Messenger RNA biogenesis [BR:
sbro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GQF42_06555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
DUF3086
Spore_III_AA
AAA_22
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QHA02990
UniProt:
A0A6I6MZD4
LinkDB
All DBs
Position
1371797..1372948
Genome browser
AA seq
383 aa
AA seq
DB search
MTTTTLEHPPVVPKTPAARLVTGVLDIDTQGKGRLRATNLLSTPADPQVPAALIRRHGLR
RGDLVEGAPGDRRALTEVTRVEGRVLADPRARRHFHDLTPLHPHDRLRLEHPGSGPAGRV
TDLLAPVGKGQRGLVVAPPKSGKTVLLQQLAAAVAGNHPECRLMVLLLDERPEEVTEMRR
SVRGEVYASTFDRAAKEHIALAELVVERAKRLVEAGEDVVLLLDSLTRLCRAHNNASAAG
GRTLSGGVDAGALLGPKRFFGAARQAEEGGSLTILATVLVDTGSRADQYYFEELKSTGNM
ELRLDREAAARRLFPAVDIDATGTRREELLLTPAELTVVHGLRRALRTREGGPSGLETLL
ERLRATPDNATFLRQIRPTLPTG
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccacactcgaacaccctcctgtggtccccaagaccccggccgcccggctc
gtcaccggtgtcctcgacatcgacacgcaggggaagggccggctgcgggccacgaacctc
ctctccaccccggccgacccccaggtgccggccgccctgatccggcgccacgggctgcgc
aggggcgacctcgtcgagggcgcgccgggcgaccggcgtgcgctgaccgaggtcacgcgc
gtcgagggacgggttctggccgatccgcgcgcccggcgccacttccacgacctcaccccg
ctccacccgcacgaccgcctccgcctggaacatcccgggtcgggaccggccggccgggtc
accgacctcctcgcgccggtcggcaagggccagcgcgggctcgtcgtggccccgcccaag
agcggcaagacggtgctgctgcagcagctcgccgccgccgtggccggcaaccaccccgag
tgccggctgatggtgctgctgctggacgagcggcccgaggaggtcaccgagatgcgtcgc
tcggtgcgcggcgaggtgtacgcctcgaccttcgaccgggccgccaaggagcacatcgcg
ctggccgaactcgtcgtcgaacgggccaaacgcctggtggaggcgggcgaggacgtcgtc
ctcctgctggattcactgacccggctgtgccgggcccacaacaacgcctccgccgccggc
ggacgcaccctgagcggcggtgtcgacgcgggcgcgctgctcgggcccaagcggttcttc
ggtgccgcccggcaggccgaggaggggggctcgctcaccatcctcgccaccgtgctggtg
gacaccggttcccgcgccgaccagtactacttcgaggagctgaagagcacgggcaacatg
gagctgcgcctcgaccgcgaagccgccgcccggcgtctcttccccgctgtggacatcgac
gccaccggcacccgccgcgaggaactcctgctcacaccggcggagttgaccgtcgtacac
ggcctgcgccgcgccctgcgcacccgggagggcggtccgtccggcctggagaccctactg
gagcggctgcgtgccacccccgacaacgccacgttcctgcgccagatccggcccaccctg
ccgaccggctga
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