Streptomyces broussonetiae: GQF42_09005
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Entry
GQF42_09005 CDS
T07359
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sbro
Streptomyces broussonetiae
Brite
KEGG Orthology (KO) [BR:
sbro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbro03400
]
GQF42_09005 (sbcD)
DNA repair and recombination proteins [BR:
sbro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GQF42_09005 (sbcD)
Archaeal homologous recombinant proteins
GQF42_09005 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
QHA03387
UniProt:
A0A6I6N3E9
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Position
complement(1954554..1955717)
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AA seq
387 aa
AA seq
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MRLLHTSDWHLGRAFHRVNMLGAQAEFIGHLVTTVREHAVDAVVVSGDVYDRAVPPLAAV
ELFDDALHRLADLGVPTLMISGNHDSARRLGVGAGLIERAGIHLRTDPAAAGTPVVLADD
HGDVAFYGLPYLEPALVKDEFAVDRAGHEAVLGAAMDRVRADLATRARSTRSVVLAHAFV
TGGESSDSERDITVGGVAAVPSAVFGGVDYVALGHLHGCQTITERVRYSGSPLAYSFSEA
GHRKSMWLIDLGADGSVTAERLECPVPRPLARIKGTLDDLLADPALARHEDAWVEATLTD
PVRPADPMARLTERYPHTLSLVFAPERSPDDAGASYARRLAGRSDQQVAQDFVAHVRGAG
PDDGELDVLREAFDAVRADDAVREVAR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagacttctgcacacgtccgactggcatctcggccgggccttccaccgggtgaacatg
ctcggggcccaggccgagttcatcggtcacctcgtcaccaccgtgcgcgagcacgccgtg
gacgcggtggtcgtgtccggtgacgtgtacgaccgcgcggtgcccccgctcgccgcggtc
gagctgttcgacgacgcgctgcaccgtctcgccgacctcggcgtgcccacgctgatgatc
tccggaaaccacgactcggcccgccgtctcggcgtcggtgccgggctcatcgagcgcgcg
ggcatccatctgcgcaccgacccggccgccgccggcaccccggtcgtactggccgacgac
catggcgatgtggccttctacggtctgccgtatctcgaaccagccctggtgaaggacgag
ttcgcggtggaccgggccgggcacgaggccgtgctcggcgccgcgatggaccgcgtccgc
gccgacctcgccacacgcgcgcggagcacccggtccgtcgttctcgcccacgccttcgtc
accggtggcgagtccagcgacagcgaacgggacatcacggtcggcggcgtggcggccgta
ccgtcggccgttttcggtggcgtcgactatgtggccctcggccatctgcacggctgccag
accatcaccgagcgcgtgcgctactccggctccccgctcgcctactccttctccgaggcg
ggccaccgcaagagcatgtggctgatcgacctcggcgccgacggctccgtcaccgccgag
cgactcgagtgcccggtgccgcgccccctggcccgtatcaagggcaccctggacgacctc
ctcgccgatcctgcgctcgcccgccacgaggacgcctgggtcgaggccacgctcaccgac
ccggtccgcccggccgaccccatggcccgcctcaccgagcgctacccgcacaccctcagc
ctcgtcttcgcccccgagcgatccccggacgacgccggggcgtcgtacgcccggcgcctc
gcgggccgcagtgaccagcaggtcgcccaggacttcgtcgcccatgtgcgcggcgcgggg
ccggacgacggggagctggacgtgctgcgcgaggcgttcgacgcggtacgcgccgacgac
gccgtacgggaggtggcccgatga
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