Streptomyces broussonetiae: GQF42_13285
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Entry
GQF42_13285 CDS
T07359
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sbro
Streptomyces broussonetiae
Pathway
sbro03030
DNA replication
sbro03430
Mismatch repair
sbro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GQF42_13285 (dnaE)
03430 Mismatch repair
GQF42_13285 (dnaE)
03440 Homologous recombination
GQF42_13285 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbro03032
]
GQF42_13285 (dnaE)
03400 DNA repair and recombination proteins [BR:
sbro03400
]
GQF42_13285 (dnaE)
Enzymes [BR:
sbro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GQF42_13285 (dnaE)
DNA replication proteins [BR:
sbro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GQF42_13285 (dnaE)
DNA repair and recombination proteins [BR:
sbro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GQF42_13285 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
QHA04125
UniProt:
A0A6I6N5K1
LinkDB
All DBs
Position
complement(2873456..2876998)
Genome browser
AA seq
1180 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHSAQKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTMWAVNKTGLHNLFRL
SSDAYAEGWLQKWPRMDKETIAQWSEGIVASTGCPSGEVQTRLRLGQEEEALKAAADYQD
IFGKDKYFLELMDHGIDIEHRVREGLLEIGRKLGIPPLVTNDSHYTYAHEAAAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTDEMYAIDSSDAWQQGCANTLLVAEMVDTTGMFEKRD
LMPRFDIPEEGYTNVTWFKEEVRRGMHRRYPNGIPEDRQKQADYEMDIIIQMGFPGYFLV
VADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIEHGLIFERFLNPERVSMPDVD
IDFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRITKAM
PADVLGKGIDLDGITNPSHPRYNEAGEVRGMYENEPDVKKVIDTARGVEGLVRQMGVHAA
GVIMSSEPIIEHAPVWVRHTDGVTITQWDYPQCESLGLIKMDFLGLRNLTIMDDAVKMVE
ANKGVKLQLLEVPLDDPKTYELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSAL
YRPGPMGMNSHTNYAERKNGRQEITPIHPELEEPLKETLGLTYGLIVYQEQVQKAAQIVA
GYSLGEADILRRVMGKKKPEELAKNFTIFQEGARKNGFSDAAIQALWDVLVPFAGYAFNK
AHSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNE
SVHNFAAQGDDVILFGLEAVRNVGTNVVESIIKSRKAKGKYASFPDYLDKVEAVACNKRT
TESLIKAGAFDTMGHTRKGLMAQYEPMIDNVVAVKRKEAEGQFDLFGGMGEETSSEPGFG
LDVQFTDEEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGEHADGAV
VTIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLISTQLVEDAVVFVKGR
LDKREDVPRLVAMELMVPDLSNAGTNAPVILTIPATRVTPPMVSRLGEILSHHKGDSEVR
IKLQGPRKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgcccttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcaatgcctgcaacgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctgcacggggcgtacgacttcttccattccgcacagaaggcc
ggagtcaccccgatcatcgggatcgaggcgtatgtcgcccccgagtcccggcgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgggacgacgtctccggttccggtggt
tacacccacaagacgatgtgggcggtgaacaagaccggtctgcacaacctcttccgtctc
tcctccgacgcctacgccgagggctggctgcagaagtggccccggatggacaaggagacc
atcgcccagtggtccgaggggatcgtcgcctccaccggctgcccctccggagaggtccag
acccggctgcgcctggggcaggaggaggaggccctcaaggccgccgccgactaccaggac
atcttcggcaaggacaagtacttcctggagctgatggaccacggcatcgacatcgagcac
cgggtccgcgagggtctcctggagatcggcaggaagctcggcatccccccgctggtcacc
aacgactcgcactacacgtacgcgcacgaggcggccgcccacgacgccctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttcaagttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccatcgactcctcggacgcctggcagcagggctgc
gccaacacgctcctggtcgccgagatggtggacaccaccggcatgttcgagaagcgcgac
ctcatgcctcggttcgacatcccggaggagggctacaccaacgtcacctggttcaaggag
gaagtgcggcgcggcatgcaccgccgctacccgaacggcatcccggaggaccgccagaag
caggcggactacgagatggacatcatcatccagatggggttcccggggtacttcctcgtc
gtcgccgacttcatcatgtgggccaagaacaacggcatcgccgtgggcccgggccgaggt
tccgccgccggttcgatcgtcgcgtacgcgatgggcatcaccgacctcgacccgatcgag
cacggactgatcttcgagcgcttcctcaaccccgaacgcgtctccatgcccgatgtcgac
atcgacttcgacgagcgcaggcgcgtcgaggtgatccggtacgtgaccgagaagtacggc
gccgacaaggtcgccatgatcggcacgtacggcaagatcaaggcgaagaacgcgatcaag
gactccgcgcgcgtgctgggctacccctacgcgatgggcgaccgcatcaccaaggcgatg
cccgccgacgtcctcggcaagggcatcgacctcgacggcatcaccaacccctcgcacccc
cgctacaacgaggcgggcgaggtccgggggatgtacgagaacgagccggacgtgaagaag
gtcatcgacaccgcgcgcggtgtggagggcctggtccggcagatgggcgtgcacgccgcc
ggcgtcatcatgtccagcgagccgatcatcgagcacgccccggtctgggtgcggcacacg
gacggcgtgacgatcacgcagtgggactacccgcagtgcgagtccctcggcctgatcaag
atggacttcctgggtctgcgcaacctcaccatcatggacgacgccgtgaagatggtggag
gccaacaagggcgtcaagctccagctcctcgaggtcccgctcgacgacccgaagacctac
gaactgctctgccgcggtgacacgctcggcgtgttccagttcgacggcggcccgatgcgc
tcgttgctgcgccagatgcagcccgacaacttcgaggacatctccgccgtctcggccctg
taccggccgggcccgatgggcatgaactcgcacacgaactacgccgagcgcaagaacggc
cggcaggagatcacgccgatccacccggagctcgaggagcccctgaaggagacgctcggc
ctgacctacggcctcatcgtgtaccaggagcaggtgcagaaggccgcgcagatcgtcgcc
ggctactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgag
gaactggcgaagaacttcaccatcttccaggagggcgcccgcaagaacggcttctcggac
gcggcgatccaggccctgtgggacgtgctggtccccttcgccgggtacgcgttcaacaag
gcgcactcctcggcgtacggcctggtcacctactggaccgcctacctgaaggcgaactac
ccggccgagtacatggccgccctcctcacgtccgtcaaggacgacaaggacaagtcggcc
gtctacctcaacgagtgccgccgcatgggcatcaaggtgctcccgccgaacgtcaacgag
tcggtgcacaacttcgccgcccagggcgacgacgtgatcctcttcggcctcgaggccgtg
cgcaacgtcggcaccaacgtggtcgagtcgatcatcaagagccgcaaggcgaagggcaag
tacgcgtccttccccgactacctcgacaaggtcgaggcggtcgcgtgcaacaagcgcacc
acggaatcactgatcaaggccggcgccttcgacaccatgggccacacccgcaaggggctc
atggcgcagtacgagccgatgatcgacaacgtggtcgccgtcaagcgcaaggaggccgag
gggcagttcgacctcttcggcggcatgggcgaggagaccagcagcgagcccggcttcgga
ctcgacgtgcagttcaccgacgaggagtgggacaagacctatctgctcgcccaggagcgg
gagatgctcggtctgtacgtctccgaccacccgctcttcggtctggagcacgtgctgtcc
gacaaggccgacgcgggcatcgcccagctcaccggcggcgagcacgcggacggcgcggtg
gtcaccatcggtggcatcatctcgggcctgcagcgcaagatgaccaagcagggcaacgcc
tgggcgatcgccaccgtcgaggacctcgccggttccatcgagtgcatgttcttcccggcg
acctaccagctcatctcgacccaactcgtcgaggacgccgtggtgttcgtcaagggccgc
ctcgacaagcgcgaggacgtgccccggctcgtcgccatggagctgatggtcccggacctg
tccaacgcgggcaccaacgcgccggtgatcctcaccatcccggccaccagggtcactccg
cccatggtcagccgcctcggcgagatcctcagccaccacaagggcgacagcgaggtccgg
atcaagctccagggcccacgcaagaccaccgtgctgcgccttgaccggcaccgggtcaag
cccgacccggcgctcttcggcgacctgaaggtcctgctcggcccgtcctgcctggcgggc
tag
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