Streptomyces broussonetiae: GQF42_20715
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Entry
GQF42_20715 CDS
T07359
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sbro
Streptomyces broussonetiae
Brite
KEGG Orthology (KO) [BR:
sbro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbro03016
]
GQF42_20715 (thpR)
Enzymes [BR:
sbro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GQF42_20715 (thpR)
Transfer RNA biogenesis [BR:
sbro03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GQF42_20715 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
aGPT-Pplase3
Motif
Other DBs
NCBI-ProteinID:
QHA05396
UniProt:
A0A6I6NAN4
LinkDB
All DBs
Position
complement(4491320..4491892)
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AA seq
190 aa
AA seq
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MRLFAAVLPPEHVVQELAAEVAELKRLPGAGALRWTGRPGWHFTLAFYGEVADDVVPALS
DRLSRAAHRTPPFRLAVRGGGQFGHGRALWAGASGDLETLRLLAERAEAAARKAGVPMAE
HRRYQAHLTVARSRDGFEVRPYVDALAGFTSSDWAVAELVLMRSNLPRSGVRGEQPRYEA
VGRWALGAGG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagactcttcgccgcggtgctcccgccggagcacgtcgtccaggaactcgccgccgag
gtggccgagttgaagaggctgcccggcgccggggcgctgcgctggacgggccgccccggc
tggcacttcaccctcgccttctacggcgaggtcgccgacgacgtcgtacccgccctgtcg
gaccgcctgtcccgcgcggcccaccgcacgccacccttccggctggccgtccgtggcggt
ggccagttcggccacgggcgcgcgctgtgggccggggcgtccggggacctggagacgctg
cgcctgctggccgagcgggccgaggcggcggcacgcaaggcgggcgtgccgatggccgag
caccggcgctaccaggcacacctgaccgtggcccggagccgggacggcttcgaggtacgg
ccgtacgtcgacgctctggccgggttcaccagcagcgactgggcagtggccgagctggtg
ctgatgcgcagcaatctgccgcgctccggggtgcgcggggagcagccccggtacgaggcg
gtcggccgctgggcgctgggggcgggcggttag
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