Streptomyces broussonetiae: GQF42_29300
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Entry
GQF42_29300 CDS
T07359
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sbro
Streptomyces broussonetiae
Pathway
sbro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GQF42_29300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbro03021
]
GQF42_29300
03019 Messenger RNA biogenesis [BR:
sbro03019
]
GQF42_29300
Transcription machinery [BR:
sbro03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GQF42_29300
Messenger RNA biogenesis [BR:
sbro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GQF42_29300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
ResIII
AAA_22
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QHA06843
UniProt:
A0A6I6N2E4
LinkDB
All DBs
Position
6330140..6332122
Genome browser
AA seq
660 aa
AA seq
DB search
MSDTTDLMGARVEETAAAPATDASAPATGAGSRRRRGTGLEGMVLAELQQVASGLGIRGT
ARMRKSQLIEVIKEAQAAGGAAPKAASSPAGDAAETKPKRRATSKARTGEAAADAEKKAE
APADKAAAQQQIEIPGQPASDDAPTERRRRRATAEAGSPSASSAETVAAEAKAEAPAQQP
QAQGEARGDAGDGEGRGRRDRRERGRDRDRRGKGDDQQGGQRQQQGGQQQGGGRQDRQRD
NGPQDDDDFEGGRRGRRGRYRDRRGRRGRDEMGVEPQLAEDDVLIPVAGILDILDNYAFI
RTSGYLPGPNDVYVSLAQVRKNGLRKGDHVTGAVRQPKEGERREKFNALVRLDSVNGMAP
EHGRGRPEFNKLTPLYPQDRLRLETDPGVLTTRIIDLVSPIGKGQRGLIVAPPKTGKTMI
MQAIANAITHNNPECHLMVVLVDERPEEVTDMQRSVKGEVISSTFDRPAEDHTTVAELAI
ERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASGRILSGGVDSTALYPPKRFFGAARNI
EDGGSLTILATALVDTGSRMDEVIFEEFKGTGNMELKLDRKLADKRIFPAVDVDASGTRK
EEILLGAEELGIVWKLRRVLHALDQQQAIELLLDKMKQTKSNVEFLMQIQKTTPTPGNGD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgcacgtgtcgaggagaccgctgccgcgcccgcc
acggacgcctccgcgcctgccaccggtgccggctcccggcggcgccgcggtaccggcctc
gagggcatggtgctggccgagttgcagcaggtcgcctcgggcctgggcatcaggggcacc
gcgcggatgcgcaagagccagctgatcgaggtcatcaaggaggcgcaggccgccgggggc
gccgcccccaaggcagcgtcttcccccgccggggacgccgctgagaccaagcccaagcgc
cgcgccacctccaaggcccgtacgggtgaggccgccgccgacgccgagaagaaggccgag
gctccggccgacaaggccgcggcccagcagcagatcgagatccccggtcagccggcctcc
gacgatgcgccgaccgagcgccgtcgccgccgtgccaccgccgaggccggcagcccctcc
gcgagcagcgccgagaccgtcgccgccgaggccaaggccgaggcgcccgcccagcagccg
caggcgcagggcgaggcgaggggtgacgccggtgacggcgagggccgtggccgccgcgac
cgccgcgagcgcggccgggaccgggaccgccggggcaagggcgacgaccagcagggcggc
cagcgtcagcagcagggcggccagcagcagggcggcggccggcaggaccgccagcgcgac
aacggcccgcaggacgacgacgacttcgagggtggccgccgtggccgtcgcgggcgctac
cgcgaccgccgtggccgccgtggccgtgacgagatgggtgtcgagccgcagctcgccgag
gacgacgtcctgatccccgtcgcgggcatcctggacatcctcgacaactacgccttcatc
cggacctccggctacctcccgggtccgaacgacgtgtacgtctccctcgcccaggtccgc
aagaacggcctgcgcaagggtgaccacgtcaccggtgcggtccgtcagccgaaggagggc
gagcgccgcgagaagttcaacgccctcgtccgtctggactccgtcaacggcatggcgccc
gaacacggccgtggccgcccggagttcaacaagctgaccccgctctacccgcaggaccgg
ctccgtctggagaccgacccgggcgtgctcaccacccgcatcatcgacctcgtctcgccg
atcggtaaggggcagcgcggtctgatcgtggccccgccgaagaccggcaagaccatgatc
atgcaggcgatcgccaacgcgatcacgcacaacaaccccgagtgccacctgatggtcgtc
ctcgtcgacgagcgtccggaagaggtcaccgacatgcagcggtcggtcaagggcgaggtc
atctcctcgaccttcgaccgcccggccgaggaccacaccacggtcgccgagctggccatc
gagcgcgccaagcgcctggtcgagctgggccacgacgtggtcgtcctgctcgactccatc
acgcgtctgggccgtgcctacaacctggcggcgccggcctccggccgcatcctgtccggt
ggtgtcgactcgaccgcgctgtacccgcccaagcggttcttcggtgcggcgcgcaacatc
gaggacggcggctcgctgaccatcctggccacggctctcgtggacaccgggtcccgcatg
gacgaggtgatcttcgaggagttcaagggcacgggcaacatggagctgaagctcgaccgc
aagctcgcggacaagcggatcttcccggccgtggacgtggacgcctccggcacccgtaag
gaagagatcctgctcggtgccgaggagctgggcatcgtctggaagctgcgccgcgtgctg
cacgcgctcgaccagcagcaggcgatcgagctgctgctcgacaagatgaagcagaccaag
tcgaacgtcgagttcctgatgcagatccagaagacgacgccgacgccgggcaacggcgac
tag
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