Salipiger bruguierae: PVT71_05545
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Entry
PVT71_05545 CDS
T11963
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sbru Salipiger bruguierae
Pathway
sbru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVT71_05545 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbru03021
]
PVT71_05545 (rho)
03019 Messenger RNA biogenesis [BR:
sbru03019
]
PVT71_05545 (rho)
Transcription machinery [BR:
sbru03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PVT71_05545 (rho)
Messenger RNA biogenesis [BR:
sbru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PVT71_05545 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
S1CSD-TOTE-2
AAA_22
OB_RNB
ATPase_2
AAA_25
AAA
Fungal_virus_P2_C
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
XCC94684
LinkDB
All DBs
Position
1:complement(1153085..1154368)
Genome browser
AA seq
427 aa
AA seq
DB search
MTDAESIERLNLSDLKAQSPKDLLAMAEELEIENASTMRKGEMMFQILRERADEGWIIFG
DGVLEVLQDGFGFLRSPEANYLPGPDDIYVSPDMIRKYSLRTGDTIEGEIRAPDNEERYF
ALVDVSAINFEDPERARHKIAFDNLTPLYPDERLKMEIEDPTIKDKSARIIDLVAPIGKG
QRSLIVAPPRTGKTVLLQNIASSIEKNHPECYLIVLLIDERPEEVTDMQRSVKGEVISST
FDEPATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDA
NALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVAD
KRVFPAIDILKSGTRKEDLLTDKVDLQKTFVLRRILNPMGTTDAIEFLLSKLKQTKTNGE
FFDSMNS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgccgaaagcatcgagcgtctgaacctgtccgatctcaaggcgcagagcccg
aaggatctcctggcgatggccgaggaactcgagatcgagaacgcctcgaccatgcgcaag
ggcgagatgatgttccagatcctgcgcgagcgcgcggacgagggctggatcatcttcggc
gacggcgttctggaagttctgcaggacggtttcggcttcctgcgctcgcccgaggcgaac
tacctgccgggtcccgacgacatctatgtctcgccggacatgatccggaagtactcgctg
cgcaccggcgacacgatcgagggcgagatccgtgcccccgacaacgaagagcgctacttc
gcgctggtcgacgtctcggcgatcaacttcgaggatccggagcgcgcgcgccacaagatc
gccttcgacaacctgacgccgctctatcccgacgagcgcctgaagatggaaatcgaggat
ccgacgatcaaggacaagtcggcccggatcatcgacctggtcgcgcccatcggcaagggc
cagcggtcgctcatcgtggcgccgccgcgcaccggtaagacggtgctgctgcagaacatc
gccagctcgatcgagaagaaccaccccgagtgctacctgatcgtcctgctgatcgacgaa
cgtcccgaggaagtcaccgacatgcagcgctcggtgaagggcgaggtgatctcctcgacc
ttcgacgaacccgcgacccgtcacgtggccgtttcggaaatggtcatcgagaaagccaag
cgcctcgttgaacataaacgagatgttgtgattcttctcgactcgatcacaagacttggt
agggcgttcaacaccgtcgtgccgtcgtcgggcaaggtcctgaccggtggcgtcgatgcg
aacgcgctgcagcgtccgaagcgcttcttcggcgcggcgcggaacatcgaggagggcggc
tcgctcaccatcatcgccaccgcgctgatcgacaccggctcgcgcatggacgaggtgatc
ttcgaagaattcaagggcaccggtaactcggaaatcgtgctcgaccgcaaggtcgcggac
aagcgcgtcttcccggccatcgacattctcaagtcgggcacccggaaagaggatctgctc
accgacaaggtcgacctgcagaagaccttcgtgctgcgccgcatcctcaacccgatgggc
acgaccgatgcgatcgaattcctgctctcgaagctgaagcagacgaagacgaacggcgag
ttcttcgactcgatgaacagctaa
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