Shewanella baltica OS117: Sbal117_0398
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Entry
Sbal117_0398 CDS
T02013
Name
(GenBank) pseudouridine synthase Rlu family protein, TIGR01621
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
sbs
Shewanella baltica OS117
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbs03009
]
Sbal117_0398
03016 Transfer RNA biogenesis [BR:
sbs03016
]
Sbal117_0398
Enzymes [BR:
sbs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
Sbal117_0398
5.4.99.29 23S rRNA pseudouridine746 synthase
Sbal117_0398
Ribosome biogenesis [BR:
sbs03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sbal117_0398
Transfer RNA biogenesis [BR:
sbs03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
Sbal117_0398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AEH12195
LinkDB
All DBs
Position
438597..439289
Genome browser
AA seq
230 aa
AA seq
DB search
MYRIIADEADFIVISKSAKVHFHSQDGTAGVVAQAEQDLGIKLFAVHRLDTPTSGLLILA
KSAVAAKQFTELFTAHKVQKYYLALAKGKPKKKQGWVIGDMAKSRRSMFKLLRTKENPAI
TQFFSLSVSEGLRLYLLKPHSGKTHQLRVALASLGVPILGDDLYGGMAADRCYLHAYCLH
FRYGDEATGWRDYAYRDVPTQGEHFAAEGVIEALVEWFEPNTLAWPAKGD
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgaatcatagccgatgaggctgattttattgttatttccaaatcagccaaagtg
cattttcacagtcaggacggaacagcgggcgtagtggcgcaggctgagcaagatctgggg
attaagctttttgccgtgcatagattagacacgcccacgtccggtctgttgattctggcc
aaaagcgctgtcgccgctaagcaatttactgagctatttaccgcccataaagtgcagaaa
tattacctcgccctcgcgaaaggtaagccgaagaagaagcaaggctgggtgattggtgac
atggcaaagtcgcggcgtagcatgtttaaactgctgcgcactaaagagaatccagcgatt
acgcagtttttttcattgagtgtcagtgagggattgcgtttatatttgcttaaaccccat
tcgggtaaaacccatcaattaagagtcgccttagcaagcttaggtgtgccgattttaggc
gatgatttatacggcggcatggcggcggatcgttgttatctgcacgcctactgtctgcat
tttcgctatggcgatgaagcgactggctggcgtgattatgcgtatagggatgtgccgact
caaggtgaacattttgccgctgaaggtgtgattgaggcgctggttgaatggtttgaaccc
aatactttggcttggccggcgaaaggggattaa
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