Shewanella baltica OS117: Sbal117_0649
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Entry
Sbal117_0649 CDS
T02013
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22051
miniconductance mechanosensitive channel
Organism
sbs
Shewanella baltica OS117
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbs02000
]
Sbal117_0649
Transporters [BR:
sbs02000
]
Other transporters
Pores ion channels [TC:
1
]
Sbal117_0649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
AEH12439
LinkDB
All DBs
Position
complement(724865..728068)
Genome browser
AA seq
1067 aa
AA seq
DB search
MPRILLFVIAFFSFSVLANSPLQLDKRLGINKQDQQQNLSIDEQINDLKINIEKLAASAT
SFQQAQIDFEQHKKRTNQALKEAYKPLSLEKGTDLSQQASMAYIRLSELKESESTLGRQV
NDLLQRHNDLPTVIASARQSVAQNKKAELAPLDTPTGELQQTQRLFFEQSLATNEAELAS
SQKRIELTQLQLQLVRQQLVQQEALIETINKAINKQRQQQTDATLAKNLVNTGKVVDPIT
RNIADTNQIYGQKLQTLTLQINNVVEQQEQSETQYQSQAKQLANIQEQITWVKMNSAFGE
RFLQMLQSLPKPPNHEKLQTLIADARLDRYHLEQQQALNDQELEQPGLYNEQQIKLLHSQ
QSLISQLMQSYDQYLSELGKLKVNYQQLSQQHLTLKNTLNEHLFWVPNAASISKLWLTDL
ERSAVWLVQQAQWDELGKAWEEQNDYWSWWIILLVLCLVVQDLITPKFNRLLNHYTTYVG
NVTQDKFIYTLKALACSVSYALIKPFPVIMAGLIFYQSDRNFVQAVGMGILAIGLVYLLY
RFIFILTLDKGVLVGHFKRPSKLIQAGQSRLRHFVLVASPLLGLMGFTEVLDTSLVRNSI
GRGAFIVFCIVLFLLYKDILILSRKNSDAKKDGKNKKLIQKILWTLLISVPLLSAGLAFR
GYYFTAFQMLLQLQLSIVLGLGFLLLYQLIKRWMLIERRRIAFDRAKAKRAERLAQREKG
ETHHLSADGLDTYEEPVVDLETISSQSLGLVRSLLLLAFLASLIGLWTQTHTALFSFLDG
ITLWTTNTSINGLEQQLPITMKSLMFGLIVVGFSLMIATNLPGLLELMILQRLDLSPGTG
FAITTVSRYLVVFLGLLIGFSNLGMEWSKLQWLIAALSLGLGFGLQEIFANFISGLIILF
EKPVRIGDTVTIRDLTGTVSKIQIRATTIIDWDRKEIIIPNKAFITEQLINWSLSDPITR
VIVYVSVARDSDPAKVEATLYQAVQECEDALASPEPEVWFAGFGKHTQDYEVRAYAKDMS
ARWPLRHDLHKRVTKKLKENNLELAYPQMEIHIKNGQSREQQGIIRS
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtattttattgttcgttattgcttttttctcattttccgtcctagccaattcg
cctttgcagttggacaaacgtcttggcataaacaagcaagatcagcaacaaaatctcagc
attgatgaacaaattaacgacctaaaaattaacatagagaagctcgccgccagtgcgacc
agtttccaacaggcgcaaatcgattttgaacaacacaagaagcgcaccaatcaagcactg
aaagaagcctacaaacctctctctctggaaaaaggcacagacctcagccagcaagcttcg
atggcctatattcgtttatctgagcttaaagaaagcgaatcgacccttggccgacaagta
aacgatttattacagcgccacaacgacttacccacagtgatcgccagcgcgaggcagagt
gtcgcccaaaacaaaaaggctgaactcgccccacttgataccccaacgggtgagttacaa
caaactcaacgactcttctttgaacaaagccttgcgaccaatgaggctgaactcgccagc
agccaaaaacgcattgaactgactcaattacaattacagctagtacggcaacaactcgtg
cagcaagaagccttgattgaaaccatcaacaaggcgatcaataaacaacgtcagcaacaa
accgatgccactttagccaaaaacttagtcaacacgggcaaagtcgtcgatcctattacc
cgcaacattgccgacactaaccagatttatggccagaaactgcaaaccttaaccttgcag
atcaacaatgtggtcgagcaacaagagcagtcggaaactcaatatcaatcccaagccaaa
cagttggcgaacatccaagaacagatcacttgggtcaaaatgaactccgcctttggtgag
cgctttttgcaaatgttgcaatcactgcctaagccgccaaaccacgaaaaactgcaaacc
ctgatcgccgatgcgcgcctagacagataccatttagagcagcaacaagcccttaatgat
caagaattagaacagcccggcttgtacaatgagcaacagattaaactactgcactcgcag
caaagtttgatctcgcagttgatgcaaagctatgaccaatacttgagtgaattaggcaag
ttgaaggtcaactatcaacaactgagtcagcaacatctcaccctcaaaaatacccttaac
gagcatttattctgggtgcctaatgctgccagtatcagtaagttatggctgaccgacctt
gagcgcagcgcggtttggttagtacagcaagcgcagtgggatgaactggggaaagcgtgg
gaagagcaaaacgattattggtcttggtggatcatattgctggtactgtgtttagtcgta
caggacttaatcacgcctaaattcaatcgcttgctaaatcattacaccacttatgtgggc
aatgtgacccaagataaatttatttatactctcaaggcactcgcctgtagtgtcagttat
gccttgataaaacccttcccggtgatcatggcgggattgattttttatcaatccgatcgc
aactttgtgcaagcagtgggcatgggcatactggcgattggtttagtttacctcttatat
cgcttcatctttattctgacgctcgacaaaggcgtactcgtgggccatttcaaacgcccc
tcgaagctcatccaagcgggacaatcaaggctcaggcactttgtgctggtcgccagtcca
ttattaggcttgatgggctttaccgaagtactcgacacctcactggtgcgcaacagcata
ggccgtggtgcctttattgttttctgtatcgttttattcttgttatacaaagatatctta
attcttagccgtaaaaactcggatgccaagaaagacggtaaaaacaaaaaactcattcag
aaaatcctctggaccttgctgatttctgtacctttgttgagtgccggattagcctttaga
ggttactacttcaccgctttccaaatgctgttacaactgcaattgtcgatcgtacttggt
ctcggtttcttgctgttataccaactgatcaaacgctggatgttaattgaacgtcgtcgt
atcgccttcgaccgcgccaaggcaaaacgtgccgaacgcttggcccaacgggagaaaggc
gaaacccatcatctctccgccgatggactcgatacctacgaagaacccgtggtcgatctg
gaaaccatttcgagccaatccctcggcctagtgcgttcactgttgttattggccttttta
gccagcttgattggtctgtggactcaaacccatacggcgctgttttccttcctcgacggc
atcacgctgtggacgactaataccagcattaatggcctagaacaacagttgcccattacc
atgaagtccttgatgtttggcctgatagtggtcggtttctcgctgatgattgccactaat
ctccccggcttacttgagttgatgatcctacaaagactcgatctctccccaggcacaggg
tttgcgatcacaaccgtcagccgttatctggtggtgttcttagggttattaatcggcttc
tctaatctcgggatggaatggtctaagttacaatggctaattgctgcactatcgctcggt
ttaggttttggtttacaagagattttcgccaactttatttcgggtctgatcattttattt
gaaaagccagtgcggattggcgacacagtgacgattcgcgatttaacgggaaccgtgagt
aaaattcaaattcgggcgacaacgattatcgattgggatagaaaggaaattatcatcccg
aacaaggcctttatcacagagcagttgatcaactggtctttgtcagatcctattactcgg
gtcattgtttatgtgtcggtggcgcgggattctgatcccgccaaagtcgaagcgacgctg
taccaagcggtgcaagaatgtgaagatgcacttgccagcccagaacctgaagtctggttt
gccggctttggtaaacacacccaagattatgaagtgcgcgcctatgcgaaagatatgtcg
gcacgttggccactgcgccatgatttacataaacgagtgactaaaaaactcaaagaaaac
aatctcgaactcgcctatccgcagatggaaatccatattaagaatggtcaaagtcgagag
caacaaggcattattagaagctaa
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