Shewanella baltica OS117: Sbal117_0784
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Entry
Sbal117_0784 CDS
T02013
Name
(GenBank) Conserved hypothetical protein CHP03549
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
sbs
Shewanella baltica OS117
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbs03009
]
Sbal117_0784
Ribosome biogenesis [BR:
sbs03009
]
Prokaryotic type
ribosomal protein modification factors
Sbal117_0784
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
AEH12569
LinkDB
All DBs
Position
873773..875962
Genome browser
AA seq
729 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCK
ARDIPTDNIRLSQNNIVDPEDRYNQIFQIQVELPEDISDKDREGILRSIDRCTVKKVVQT
GPEFKIETVENLDADANAMLMGQPNGASSTFILGKDLPLEQTIANMTGMLADLGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGTE
IANSEFVHYPNEKWFALEEDDALPAGILDDYCLEIYNPDDELCGSHLIDTNSGNIKRGIC
AIPYTRKSDGETVYFPSNLIENLFLSNGMSAGNNLQEAHVQCLSEIFERAVKRQIIEQEI
VLPDVPMQVLEKYPSILAGINGLEEQGFPVVVKDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRF
FSSKFDYEFCEWDFSGSSEEEASGLFGILEALGKEVYIAEFTDLGASACRILVPDYSEIY
PVDDLIWDNTNKALAYREDILNLHSLSTKQLVNLVNRLEESQLDNYTDIRTLIGIVFDEN
TVWGQLTIIELKILIYLALGAHEDAIELVGEFLQFNDNTVKRGLFYQAMNAVLEVTLDDE
LELDDFIHNFNRMFGKDVMDNVVGSVKGKVRFYGLTKTSMQLEGIEPHLRLIESYKKLHQ
ARKAAKDAN
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagttaattttctcgacaatcttagacttgaagccaagtttgatgatttt
accgttaccgccgatcagccgatccgctacaaaggtgatggttctgcccctagtccgttt
gattatttcttagcgtcgtcagccctgtgtgcggcctatttcgttaaggtgtattgcaaa
gcccgcgatattccaacggataacatcagactgtcgcagaacaatattgtcgatcctgaa
gatcgctacaaccagattttccaaattcaggttgaattgccagaagatatttccgataaa
gatcgcgaaggtattttgcgttcaattgaccgttgtaccgttaaaaaagtggtgcaaacg
ggaccagaatttaagattgaaaccgttgaaaacctagacgcagacgccaatgccatgctg
atgggccagcctaatggcgcatcgagcacctttattctgggtaaagatctgccactggag
cagaccattgccaatatgacgggcatgctcgccgatcttggaatgaagatagagatctca
tcatggcgtaacatagtgccgaacgtgtggtcactgcatattcgtgacgccgcttcgcca
atgtgttttaccaatggtaaaggcgcgaccaaagaaagcgcgctgtgttcagcgctcggc
gagtttattgagcgtttgaataacaactttttctataatgatcaattctttggtactgaa
atcgctaatagcgaatttgtgcattatcccaatgaaaagtggtttgcgttagaggaagac
gatgcgttgcctgcgggtattctggatgactattgtttagagatttataacccagacgac
gagctgtgcggttcgcacttgattgatactaactcgggcaatattaagcgcggcatttgt
gcgatcccttacacccgtaaatctgacggtgaaacggtttacttcccatcgaacctgatt
gaaaacctatttttaagtaacggcatgagcgcgggcaataacctgcaagaagcgcatgtg
cagtgtttgtcagagatttttgagcgtgccgttaaacgccaaatcattgagcaagaaatt
gttctaccagatgtaccaatgcaggtacttgaaaaatatccaagtattctcgcgggcatt
aacggcttagaagagcaaggtttcccagttgtagtcaaagacgcttcactcggcggtcaa
ttccccgtgatgtgcgtgaccctaatgaacccgaaaactggcggcgtgtttgcctcattt
ggcgcgcacccaagctttgaagtggcattagaacgtagcttaactgagctgttgcaaggc
cgcagtttcgaaggcttaaacgacgtgccaaaaccgacctttaatagcatggcggtcagc
gagccagaaaactttgttgagcactttattgattcaacaggggtgatttcatggcgcttc
tttagcagtaaattcgattatgaattctgtgaatgggatttctctggtagcagcgaagaa
gaggccagcggtctgtttggtatcttagaagcgttaggtaaagaggtgtatatcgctgag
tttactgatttaggtgcgtcggcatgccgtattttagtacctgattattctgaaatttat
ccagttgatgacttgatttgggataataccaacaaggcgctggcgtaccgtgaagatatc
ctaaatctgcattcgttaagcactaaacagctggtcaatttggttaatcgtttagaagaa
agccaactcgataactacacggatatccgcaccttaatcggcattgtattcgatgaaaat
accgtttggggtcagctcaccattatcgagcttaagatcctgatttatttggcactcggt
gcacatgaagacgcgattgagttggtcggtgagttcctgcagtttaacgacaataccgtt
aaacgcggcctgttctaccaagccatgaatgctgtattggaagtgactttagatgacgag
ttagagcttgatgattttatccataatttcaaccgcatgttcggtaaagatgtgatggac
aacgttgttggctcggtcaaaggtaaagtgcgtttttatggcctgactaagaccagcatg
cagctcgaaggcattgagccgcatttaagattgatagaaagctataaaaagctgcatcaa
gcccgtaaagctgcgaaagacgcgaattaa
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