Shewanella baltica OS117: Sbal117_1720
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Entry
Sbal117_1720 CDS
T02013
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sbs
Shewanella baltica OS117
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbs03032
]
Sbal117_1720
03036 Chromosome and associated proteins [BR:
sbs03036
]
Sbal117_1720
03400 DNA repair and recombination proteins [BR:
sbs03400
]
Sbal117_1720
DNA replication proteins [BR:
sbs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sbal117_1720
Chromosome and associated proteins [BR:
sbs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Sbal117_1720
DNA repair and recombination proteins [BR:
sbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Sbal117_1720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
VWA_3
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
AEH13473
LinkDB
All DBs
Position
1981827..1982099
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEKIASGADISKAAAGRALDSFIAAVTEGLKEGDKISLVGFGTFEVRERAERTG
RNPQTGEEIKIAAAKIPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatctgaactaatcgagaaaatcgcatctggtgctgacatttctaaagccgct
gccggccgtgcactggattcttttatcgctgctgtgaccgaaggtctgaaagaaggtgat
aaaatttctcttgttggttttggtacttttgaagtgcgtgaacgcgctgagcgtactggt
cgcaacccacaaacgggtgaagaaatcaaaatcgcagcagctaaaattccagcattcaaa
gctggtaaagcactgaaagacgctgttaattaa
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