Shewanella baltica OS117: Sbal117_2486
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Entry
Sbal117_2486 CDS
T02013
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sbs
Shewanella baltica OS117
Pathway
sbs03030
DNA replication
sbs03430
Mismatch repair
sbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sbal117_2486
03430 Mismatch repair
Sbal117_2486
03440 Homologous recombination
Sbal117_2486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbs03032
]
Sbal117_2486
03400 DNA repair and recombination proteins [BR:
sbs03400
]
Sbal117_2486
Enzymes [BR:
sbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sbal117_2486
DNA replication proteins [BR:
sbs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sbal117_2486
DNA repair and recombination proteins [BR:
sbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sbal117_2486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DUF3572
DNA_pol_A_exo1
Phage_TAC_11
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
AEH14194
LinkDB
All DBs
Position
2839660..2840286
Genome browser
AA seq
208 aa
AA seq
DB search
MPTSAANTLVVLDFETTGLSPNQGDRAIEIGAVLIEDGVITQRFSELMNPGFRISRFIED
YTGISNQMLRDAAPCNEVMARFADFIADHNLVAHNAAFDQRFLDAEFAQIRHRYLGQFGC
SLLVARRLYQAAPNHQLGTLVRYKQLPTDGTFHRALADAEMTGHLWLAMLADLQQEFGLC
SPTFELLQKLAKKTKAEVPKFLRQYAVK
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcctacatcagctgctaacactttggtcgtgctcgactttgaaaccacggggctgtcg
cccaatcaaggggatcgcgcgattgaaatcggggctgtgctgattgaagacggtgtgatc
actcaaagattttctgagttaatgaacccaggatttagaataagtcgctttattgaagac
tacactgggatcagcaatcaaatgctcagggacgcggcgccctgcaatgaagtgatggcg
cgttttgcggactttatcgccgatcacaatttagttgcccacaatgcggcgttcgatcag
cgctttttagatgcggagtttgcccaaattcgccatcgttatcttgggcaatttggctgt
tccttgctggtggcgagacgtttgtatcaagcggcacccaatcatcagttaggtacttta
gtgcgctataaacagttaccaaccgatggcacttttcaccgcgccttagccgatgccgaa
atgaccggccatttgtggctggctatgctggcagaccttcagcaagagtttggactctgc
tcaccgacctttgagttactgcaaaaattagcgaagaaaaccaaagcagaggtgccgaag
tttttacgccaatacgccgtcaagtga
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