KEGG   Shewanella baltica OS117: Sbal117_2950
Entry
Sbal117_2950      CDS       T02013                                 
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
sbs  Shewanella baltica OS117
Pathway
sbs02020  Two-component system
Brite
KEGG Orthology (KO) [BR:sbs00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Sbal117_2950
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:sbs02022]
    Sbal117_2950
Two-component system [BR:sbs02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   Sbal117_2950
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 AAA_7 AAA_3 AAA_16 HTH_50 AAA FleQ Torsin HTH_28 ATPase
Other DBs
NCBI-ProteinID: AEH14641
LinkDB
Position
3404203..3405582
AA seq 459 aa
MSVPNSIQDYSVLIIDDEPHIGTVLVQLFELEGIKALATTEPKGIAKHLHKDWAGMVISD
VNMPQLDGISLMQQIRLQDPDLPVVLLTGFGDIAMAVNALKQGAYDFLEKPFNNEHILDV
VKRALDKRSLTLENRKLKKDLESQSVPGPRILGNSVGINRMRHIIDQVIDTPADVLIEGE
TGTGKELVARYLHDHSSRSQANFVAINCGAIPENLIESELFGAEAGAFTGVDKMRIGKFE
YANGGTLFLDEIESTPLSLQVKLLRVLEDRKVERLGSNKSISLDIRVIAATKVDLKSLCD
TGEFRQDLLYRLNLVTVPIPPLRDRREDIPLLFLHFARVASARYHKALIALNAEQNAILS
SHDWPGNVRELRNLAERFVLLGGEAAFAGTLGNTPSLHSSMSLLQRVEFFERVLIEEALS
HNKGSIKQTMEQLELPRKTLYDKMRKYDLDRKQYINSDD
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgagtgtgcccaattccatccaagattattctgttctcatcatcgacgatgagccacac
ataggcacagttctcgttcagctatttgaacttgagggcattaaggcgctcgccaccaca
gagcctaaagggatcgctaagcacctgcataaagattgggcgggaatggtgatatcagat
gtcaacatgccgcaattagatggcatcagcttaatgcaacaaatccgcctgcaggacccc
gacctccccgttgtgttattgacagggtttggggatatcgccatggcagtcaatgcctta
aagcaaggtgcctacgactttctcgaaaagccctttaataacgagcatatactcgatgtg
gtcaagcgcgccttagataaacgcagcctgaccctagagaaccgtaagcttaaaaaggat
ctcgaaagtcagagcgtaccaggccctcgcattttgggtaacagtgtcggcatcaaccgc
atgcgccacatcatagatcaagtgatagacaccccagctgatgtgttaatcgaaggcgaa
acaggcacaggtaaagagctcgtcgcccgctatttacacgatcacagcagccgcagccaa
gccaactttgtcgccatcaactgtggtgcgatccctgaaaacttaattgaaagtgagctc
tttggcgccgaagcgggtgcctttaccggcgtcgataagatgcgcattggtaagtttgaa
tacgccaacggcggtacattatttttagatgaaattgaaagtacaccactgtcgctgcaa
gtaaaactgctgcgggtacttgaagatcgtaaagttgaacgcttagggtcaaacaaaagc
atcagccttgatatacgggtaattgccgccactaaggtggatttaaaaagcttgtgtgac
acgggggaatttcgccaagacttgttgtatcgcttaaatctggtgactgtacctatccct
cccctgcgggatcgccgtgaggacattcctctgctgttcctgcactttgcacgggttgca
tcggcacgctatcacaaagcgcttatcgccttaaatgccgagcaaaacgccatactctcc
tcccacgactggccgggcaatgtgcgtgagttacgtaatctcgccgaacgctttgtgcta
ctaggtggagaagctgcctttgctggcactttgggcaacaccccaagcctgcactcgagt
atgtccttactgcaacgagtcgagttttttgaaagggtattgattgaagaagcgcttagc
cacaacaagggcagcattaagcaaacaatggagcagctggaactgcctcgcaaaaccctc
tacgacaaaatgcgaaaatacgatttagaccgcaagcagtacattaactccgatgactag

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