Shewanella baltica OS117: Sbal117_3047
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Entry
Sbal117_3047 CDS
T02013
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
sbs
Shewanella baltica OS117
Pathway
sbs02020
Two-component system
sbs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sbal117_3047
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sbal117_3047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbs03021
]
Sbal117_3047
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sbs02035
]
Sbal117_3047
Transcription machinery [BR:
sbs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sbal117_3047
Bacterial motility proteins [BR:
sbs02035
]
Flagellar system
Flagellar assembly proteins
Stator
Sbal117_3047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
UPF0122
HTH_23
HTH_10
Ketoacyl-synt_2
GerE
CT_C_D
Motif
Other DBs
NCBI-ProteinID:
AEH14735
LinkDB
All DBs
Position
complement(3519385..3520098)
Genome browser
AA seq
237 aa
AA seq
DB search
MNKAAAYTCLDNKSSIVEQYAPLVKRIAHHLLARLPASVQLDDLLQAGMMGLLEASSKFD
GGKGAKFETFAGIRIRGAMLDEIRRGDWVPRSVHRNNRKVAHAIDELEQALGRDARDTEI
AEKLDMTLDEYHHILNDVSVGKIIGIEDLGVSQDILTVSDRSDDDSFEALAENQFHSALV
EAIKLLPERDALVLSLYYDEALNLKEIGAILEVSESRVSQILSQAMLRLKAKLKHWT
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagccgctgcgtatacttgtttagacaataaatcgtcgatcgttgaacagtat
gctccgttggttaaaagaattgcgcatcatttactcgccagactacctgcctccgtgcag
ttagatgatttactccaagctgggatgatggggttattagaagcatcatccaagtttgat
ggtggcaagggtgcgaaatttgaaaccttcgccggcatacgcatacgtggggccatgtta
gatgaaattcgccgcggcgattgggtccctcgttccgttcatcgtaacaaccgcaaggtt
gcacacgctatagatgagttagagcaagcactgggtcgtgatgcacgcgacacagaaatt
gcagaaaaacttgatatgacgctcgatgagtaccatcatattcttaacgatgtttctgtc
ggaaaaatcatagggatagaagacttaggcgtatctcaggatatacttacagtgagtgat
cggtccgatgatgattcatttgaagcattagctgagaaccaatttcattctgctctggtt
gaggcaattaaattattgcctgaaagagatgcattagtgttatccctgtactacgatgaa
gcattgaatttaaaagagattggcgccattcttgaagtcagtgaatcgcgggttagccag
atattaagtcaggcaatgttgcgattgaaagctaaactcaagcactggacataa
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