Shewanella baltica OS117: Sbal117_3125
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Entry
Sbal117_3125 CDS
T02013
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sbs
Shewanella baltica OS117
Pathway
sbs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Sbal117_3125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbs03400
]
Sbal117_3125
Enzymes [BR:
sbs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Sbal117_3125
DNA repair and recombination proteins [BR:
sbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Sbal117_3125
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEH14812
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All DBs
Position
3607047..3608393
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AA seq
448 aa
AA seq
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MQGTKNNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSSPSSGHWYLTLKDHSSQIRCA
MFKGRNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFDALKMKL
AAEGLFAADTKRPLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETA
AQSICQAINIANQRLEVDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHEVD
TTISDYVADIRAPTPSAGAELLSQDSDNKAQKLATALSRLQQSAKHYQLKQERRLSLLEH
RLQRQDPKRTLQQFEQRFDEMQLRLESALLNRLHILSRRQQLLASRLEQQSPKHKLTIEG
NRLSYLASRLQDALQDKLSQSEQRIKYAAHQLETVSPLATLSRGYSITTDIHNQVVDSAD
KLTIGDSLQTRLRHGQVISTVTQIKPLE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcaccaaaaacaatatttatactgtctcgcggctcaatggtgaagtcagacaa
attctcgagggacaactgggtaaaatttggctcaatggcgaaatatccaacttttcctcc
cccagctcaggtcattggtatctcaccttaaaagaccactcttcccagatccgttgcgcc
atgtttaaaggccgtaatcaaacggtcagctttaagcccatcaatggtcagcaagtgtta
gtcaaaggcgcgatcagcgtgtatgaacccagaggcgactatcaattattaattgagtcc
atgctgcctgcaggggatggattactcgcccagcagttcgatgcactcaaaatgaaactc
gccgccgaaggattattcgccgcggacaccaaaagaccattgccgaaaaatatccaacgt
attggcgtaatcacttcgccaaccggcgcggcaattcgcgacgtcttacacgtactcgca
aggcgcgacccttcaatcgaagtcattatctatccgactcaggttcaaggcgaaactgca
gcgcagagtatttgtcaggcaatcaatatcgccaaccagcgtttagaggtcgacgtatta
ctgcttacccgcggcggcggttcgcttgaggatttgtggtgttttaacagcgaagccctc
gcccacacaatttataacagcgccctgcccgtggtcagcgccgtcggccacgaagtcgac
accaccatcagtgattacgtggctgatattcgcgccccaacaccatctgcaggtgccgag
ttgttatcccaagatagcgacaataaggcgcaaaaactcgcaacagccttatcgcgcttg
caacaaagtgcgaaacattatcaacttaagcaagaaagacgactcagtttgcttgagcac
agactgcagcgccaagatcccaaacggaccctgcaacagttcgagcaaagattcgatgag
atgcaattaagactggagtcggcgctgttgaatcgcttgcacatactcagccgccgtcag
cagttactcgcaagtcgccttgaacagcaatctcccaagcataagctcaccattgagggt
aaccgcctaagttatcttgcgagtcgcttacaggatgcattacaggacaaactgagccaa
agtgagcaacggataaaatacgcggcccatcaactcgaaaccgtcagtccgcttgctacc
ttgagccgtggttacagcatcaccactgacatccacaatcaagtggtcgactctgccgat
aaactgacaatcggtgatagcctgcaaacccgcttacgccatgggcaagtgatatcaacc
gtcactcagatcaagccgctcgaataa
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