Shewanella baltica OS117: Sbal117_3376
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Entry
Sbal117_3376 CDS
T02013
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
sbs
Shewanella baltica OS117
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbs03021
]
Sbal117_3376
03009 Ribosome biogenesis [BR:
sbs03009
]
Sbal117_3376
Transcription machinery [BR:
sbs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Sbal117_3376
Ribosome biogenesis [BR:
sbs03009
]
Prokaryotic type
rRNA transcription factors
Sbal117_3376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
DUF2187
KH_NusA_C
S1_RRP5
DNA_pol_lambd_f
Glyoxalase_4
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AEH15055
LinkDB
All DBs
Position
complement(3894030..3895529)
Genome browser
AA seq
499 aa
AA seq
DB search
MNKEILLVAEAVSNEKAVPREKIFEALEIALATATKKKYEGDIDVRVAIDRKTGGYDTFR
RWMVVDDHGEALENPYREITLEAARYENPDIQPGEFIEDDIESVVFDRITTQTAKQVIVQ
KVREAERAQVVEQFQDQEGELITGIVKKATRESVVVDLGNNADGVLFREDLISRESFRPG
DRVRALLYSVRPEARGAQLFLSRTKPEMLIELFRVEVPEIADELIEIMGAARDPGARAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQYVINAMAPADVASI
IVDEDNHSMDIAVEADSLAQAIGRNGQNVRLATQLTGWVLNVMTVEDMNKKHQAESAKVV
ELFVNSLDVDEDFAQVLADEGFTSLEEVAYVPVSELLAIDGFDEDLVEALRERAKAAIST
RALATEEALDGVEPSEELLALEGVDRHLAYVFASKGIETLEDLAEQGIDDLIEIEELTEE
KAGELIMAARNICWFGEEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagattctgctagtcgctgaggcggtttcaaatgaaaaggccgttccacgc
gagaaaatttttgaagcgctagagattgctctggccacagcaaccaagaaaaaatatgaa
ggtgatattgacgttcgtgttgctatcgaccgtaaaaccggtggttatgatactttccgt
cgttggatggtggttgatgatcacggtgaagcgttagaaaatccttaccgcgaaatcacg
ttagaagcggcacgatacgaaaatccagacatccagcctggcgagtttatcgaagacgat
atcgagtcagtggtgtttgaccgtattaccactcaaactgctaagcaagtgatcgtacag
aaagtacgtgaagctgaacgtgctcaagtggttgaacagttccaagatcaagaaggtgag
ttaatcactggtatagtcaaaaaagcaactcgcgaaagcgtagtagttgacttaggtaat
aacgctgacggcgtgttgttccgtgaagatttaatttcacgtgaatctttccgtccaggc
gaccgcgtgcgtgcattattgtactcagtacgtccagaagctcgcggcgcacagttattc
ttaagccgtactaaacctgaaatgctgatcgagcttttccgtgttgaagtacctgaaatt
gctgacgaactgattgaaatcatgggcgcagctcgtgatccaggcgcgcgcgctaaaatc
gccgttaagtcgaatgaccgtcgtatcgatccaatcggtgcgtgtgtgggtatgcgtggt
gcacgtgtacaagccgtgtcgaatgaactgggtggcgaacgtgttgatatcgtgttgtgg
gatgataatccagcacaatacgtgatcaatgccatggcgccagccgatgttgcctctatc
atagttgacgaagataaccattctatggatatcgctgttgaagccgatagtttggcacaa
gccattggacgtaatggccagaacgtacgtttagcgacacaactgacaggttgggttctg
aacgttatgacagtggaagatatgaataagaaacaccaggcagaaagtgccaaggtggtt
gaattattcgttaactcactggatgtcgatgaagattttgcacaagtactggcggacgag
ggctttacgtcgctcgaagaagttgcctatgtacctgtgtctgaactattggcgattgac
ggttttgacgaagatctcgttgaagccttacgtgaacgtgcaaaagcagcgatctcaact
cgagctctcgctactgaagaagcactggatggtgtggagccaagtgaagagttactagca
cttgaaggtgttgatagacacttagcctatgttttcgctagcaaaggtattgagactcta
gaagacttggctgaacaaggcattgatgatttgatcgaaattgaagaattgacagaagaa
aaagcaggtgagctcatcatggcagcccgcaatatctgttggtttggcgaagaagcataa
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