Shewanella baltica OS117: Sbal117_3408
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Entry
Sbal117_3408 CDS
T02013
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sbs
Shewanella baltica OS117
Pathway
sbs03030
DNA replication
sbs03430
Mismatch repair
sbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sbal117_3408
03430 Mismatch repair
Sbal117_3408
03440 Homologous recombination
Sbal117_3408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbs03032
]
Sbal117_3408
03400 DNA repair and recombination proteins [BR:
sbs03400
]
Sbal117_3408
Enzymes [BR:
sbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sbal117_3408
DNA replication proteins [BR:
sbs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sbal117_3408
DNA repair and recombination proteins [BR:
sbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sbal117_3408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
KaiA_N
TraI_2_C
DUF6063
Motif
Other DBs
NCBI-ProteinID:
AEH15087
LinkDB
All DBs
Position
3928323..3929354
Genome browser
AA seq
343 aa
AA seq
DB search
MRVYPDQLSRHLNQLFPCYLIFGDDPWLIETTKDQIRQFAKRQGFDEKVQLIQETGFNWN
DLTQEWQAMSLFSSKRLIELTLPQSKPGAEGSSTLQALLQTPNPDMLLIIEGPKLANEQT
NSKWFKTLDAHGMYLPCATPEGDQFMRWLDGRIKHFKLNLQPDARAMLHSLYEGNLLAAD
QAMQLLQLLSPTNPVSADELSHYFEDQSRFTVFQLTDALLNNKQDSAQHMLAQLNGEGTA
LPILLWALFKELGLLFNLKCEQAQGVALSALWSKHRIWDKRKPLYQAALQRLSLEQLEHM
LALASKLELNLKQQGKEDWTGLTHLCLLFDPRAHRHLAHIAID
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagagtctatcccgatcaactctcccgccacctcaaccagttatttccttgttatctg
atttttggggatgatccttggttgattgaaaccaccaaagatcagatccgccaattcgcc
aagcgtcagggtttcgatgaaaaagtccaactcattcaagagacgggctttaattggaac
gacttgactcaggaatggcaggccatgagcctgttttccagtaagcgtctgattgagtta
acccttccacaatctaagcccggtgccgaaggctcaagcacactgcaagccctattgcag
acgcccaatcccgatatgctgttgattatcgaagggccaaagctcgccaacgagcaaacc
aacagcaaatggtttaagaccttagatgcccatggcatgtatctgccctgcgctacgcca
gagggcgatcagtttatgcgctggctcgatggccgcatcaagcactttaagctcaatctg
cagccggatgcccgcgctatgttgcattcgctatatgaaggcaatttactggctgccgat
caagccatgcagttgctgcaactcctgagtccaacaaatcccgtcagtgccgatgaactg
agccactattttgaggatcagtcacgcttcaccgtattccaactcacggatgcattactg
aataataaacaagatagcgcgcagcacatgctggcccagctcaatggcgaaggcacagcc
ttacctatcctgctgtgggccttgtttaaagagctcggcttgttattcaatttgaaatgc
gagcaagcccaaggcgtcgcgctgagtgcgctctggagtaaacatcgaatttgggataaa
cgtaaacctctgtatcaagcggcgctgcaacgacttagcctcgaacagttagaacacatg
ctcgcccttgcctcgaaacttgagctcaacttaaagcagcagggtaaagaggattggact
ggtcttacccacctgtgtctgttatttgatcctagagcccatcggcatctggcacatata
gccatagactaa
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