Shewanella baltica OS117: Sbal117_3610
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Entry
Sbal117_3610 CDS
T02013
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
sbs
Shewanella baltica OS117
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbs03009
]
Sbal117_3610
Enzymes [BR:
sbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Sbal117_3610
Ribosome biogenesis [BR:
sbs03009
]
Prokaryotic type
rRNA helicases
Sbal117_3610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_30
AAA_19
Helicase_C_2
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEH15285
LinkDB
All DBs
Position
complement(4163325..4164734)
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AA seq
469 aa
AA seq
DB search
MSNSDTKPNPSMAFSTLKLKPELLENLSSMGYNEMTPIQAQSLPPILAGQDVIGQGKTGS
GKTAAFGLGLLNKLDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVP
MGPQVGSLEHGAHIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPALDAII
EQAPRERQTLLFSATFPEQIQSIAKQIMYDPSMVKVEGNHDSLSIAQHFYHLDDDKARMQ
ALQLLLLEHKPESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANK
SACVLVATDVAARGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQDG
YKIALLEEYLEREITSESLPSESLLGNTPAAPTMITLQIDGGKKEKLRPGDILGALTGEN
GIEGSQVGKIQVTDYRAYVAVNRKVAKKALNKITGGRIKGKSYRAWPMK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaactctgatactaagcctaatccatcaatggctttttcgactcttaagctaaaa
cccgaactgcttgagaacctttcttctatgggctacaacgagatgacgccaattcaggcg
caaagtttgccacccattttagcggggcaggatgtgataggtcagggtaaaactggctcg
ggtaaaacggccgccttcggcttagggttactgaacaagttagacgttaaacgctttcgc
attcaaaccttagtgttatgcccaacccgcgagttggccgaccaagtggcgcaggaaatc
cgtacccttgcccgtggtattcataacgttaaagtactgacactttgcggcggtgtgcct
atggggccacaggttggctcgctggaacacggtgcgcacattattgtgggtacgccgggt
cgtatcgtcgatcacttagatcgcaatcgcttagatttaagtaatctcaacatgttagtg
ctcgatgaagccgatcgcatgttagaaatgggtttccaacccgccctcgatgcgattatc
gaacaagccccgcgtgagcgtcagacgttgctattcagcgcgacgttcccagagcaaatt
caatcgattgctaagcaaatcatgtatgacccaagcatggttaaagttgaaggtaatcac
gacagcttgagcatcgcccaacatttttatcatttagacgatgacaaggcgcgtatgcaa
gcgctgcaattattgttgttagaacataagcctgaaagcgctgtggtgttttgtaacacg
aaacgcgaaacccaaaaagtggccgatgagcttgaaggtttaggttttagcgtattggct
ttgcacggtgatttagagcaaagagacagggacgaaaccctgctgcaatttgctaataag
agtgcctgtgtcttagtggcgaccgacgttgccgcccgtggtttagatatcgatgcactg
gatgccgtgtttaactatcacgtcgcctacgacaccgaagtgcacattcaccgtatcggt
cgtactggccgtgcgggcagtaaaggcgctgcttataccttctataacgatcaagacggt
tacaagattgccttgttagaagagtatttagagcgcgaaattaccagcgaatcactgcca
tctgaaagcctgctcggcaacacgcctgcagcgccaaccatgatcactttgcagatcgat
ggcggtaagaaggagaaactgcgtccaggggatatcttaggcgcgctgacgggcgaaaac
ggtatcgaaggctcacaggtgggtaaaatccaagtgaccgattaccgcgcctatgtggcc
gttaatcgtaaggttgccaagaaagcgctgaacaaaattactggcggccgcattaaaggt
aaatcttaccgcgcttggccaatgaagtaa
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