KEGG   Shewanella baltica OS117: Sbal117_3874
Entry
Sbal117_3874      CDS       T02013                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
sbs  Shewanella baltica OS117
Brite
KEGG Orthology (KO) [BR:sbs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sbs02048]
    Sbal117_3874
Enzymes [BR:sbs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Sbal117_3874
Prokaryotic defense system [BR:sbs02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Sbal117_3874
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 ResIII HSDR_N DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: AEH15540
LinkDB
Position
complement(4448168..4451230)
AA seq 1020 aa
MKNEQQIENELITKLEDLKYTYRHDIRSKASLEQNFREKFEALNRVHLTNNEFKRLLQEI
ITSDVFSAAKTLRERGYFQREDGTPLHYTLVNIKDWCKNEFEVINQLRINHDDSHHRYDV
ILLINGVPVVQIELKSHQIVTRRAMEQIVNYKNDAGNGYNNTLMCFMQLFIVSNENQTYY
FANNRNEHFSFNADERFLPIYQLANYNNRKINHLHDFSDFFLAKCTLGQMISRYMVLVQS
EQKLLMMRPYQIFAVEAIIDCIHENRGNGYIWHTTGSGKTLTSFKASTLLKDNPEVDKCL
FVVDRKDLDRQTREEFNKFQDGCVEENTNTETLVRRMLSEDYADKVIVTTIQKLGLALDE
NSKRNQSKLKDGQLTFKERLEPLRDKRVVFIFDECHRSQFGENHKAIKNFFPRSQLFGFT
GTPIFDDNSNYTQIDGTVGSFKTTKDIFENELHSYTITNAIDDKNVLSFHIDFFGKNSKS
PDGDCKVDTVTPPPEAVVKEILAKHNAATNQRRFNAILATAKINDAIHYFEQFKIQQAQK
QALDDSYVPLNIACVFSPPAQPSKSTDEAQACNADKNVKDIKQLQEDLPQEQLDNQQEPE
QKKAALVAIINSYNQQFCTNHNINEFDLYYQDVQQRIKDQKYSNADYPHKNKIDIIIVVD
MLLTGFDSKYLNTLYVDKNLKYHGLIQAFSRTNRVLNDSKPWGNILDFRGQEKQVNQAIE
LFSGAAKDRAKEIWLVESAPVVVKKYQQAITELQTFMQSKGLDCTPSAVANLNGDTAKAE
FINHFKEVQKLKTQIEQYTELDDAQLQTVEAAMPIDSLRGFKGVYLETAKGLKRKQDQNN
GELDKTIEQLEFEFVLFASALIDYDYIMGLIAQSTQAAGQGASKHKMTRQELIDLISSQA
NLMEERDDIIAYIEHLPAGVALNVEQIKIGFQKFKAAKAATELNQMAINYDLTPQSLKDF
VDNIMKHMIFDGEQLSDLLAPLDLGWKARTQKELALMEDLIPYLHKLAQGREISGLAAYE
NT seq 3063 nt   +upstreamnt  +downstreamnt
atgaaaaatgaacaacaaattgagaacgagctaatcaccaaactagaagatctcaaatat
acctaccgtcacgatattcgtagtaaggcttcgcttgaacaaaattttcgcgagaaattc
gaagcactaaatcgtgttcatttaaccaataatgaattcaagcgcttactgcaagaaatt
attaccagtgatgtattcagcgcagcgaagacgttgcgtgaacgaggctattttcagcgt
gaagatggcacaccattacattacaccttagtgaatataaaagactggtgtaaaaatgaa
tttgaagtcattaaccagttacgtattaatcacgatgatagccaccatcgctatgacgtg
atattgctgatcaatggcgtgccagtggtgcaaatagaacttaaaagtcaccaaattgtt
actcgccgcgcgatggagcaaatcgttaactataaaaacgatgcaggtaacggatacaac
aacacactaatgtgctttatgcagttgtttattgttagcaatgaaaaccaaacctattat
tttgctaataaccgcaatgagcattttagttttaatgctgatgaacgttttttgccgata
tatcaattggctaattataataataggaaaatcaatcatttacatgatttttctgatttc
tttttagctaaatgcacgttaggtcaaatgatcagccgttacatggtgttggtacaatca
gaacaaaaactgttgatgatgcgcccatatcaaatatttgcggttgaagccataatcgac
tgtatacatgaaaatcgtggtaatggttatatttggcacaccacaggctcagggaaaacc
ttaacctcgtttaaagcctctacgttgttgaaagacaacccagaagtagataaatgctta
tttgtggttgatcgtaaagaccttgatcgccaaactcgcgaagaatttaacaaatttcaa
gacggctgtgtagaagaaaatactaatactgaaaccttagtgcggcgcatgttgtcggaa
gactatgcagataaagtcatcgtcactaccattcaaaagctcggccttgcactggatgaa
aacagtaagcgtaatcaaagtaaactcaaagacggccaactaacgtttaaagagcgccta
gagccattacgcgataaacgagttgtgtttatttttgatgaatgccatcgttctcagttt
ggcgaaaaccacaaagctattaaaaactttttcccccgatcgcagttatttggatttact
ggtaccccaatttttgacgataactcaaattacactcaaatagacggtacagttggttca
ttcaaaaccacgaaagacatatttgaaaatgaattgcactcgtacaccattaccaatgct
attgatgataaaaacgtgttgagttttcacattgatttttttggcaaaaacagcaaaagt
ccagatggcgactgcaaagtggataccgtcacgcctcctccagaggctgtagtcaaagaa
attttagcaaaacataacgctgcaaccaatcaacggcgttttaacgcaattcttgctaca
gctaaaattaatgatgctattcattattttgagcaattcaaaatacaacaggcacagaag
caagccctcgatgacagctatgttccgctcaatattgcttgcgtattctcaccacccgcg
caaccatcaaaaagtaccgatgaagcgcaagcatgcaatgcagataaaaacgtcaaagac
ataaaacaactacaagaagacttgccgcaagaacagctagacaaccaacaagagccagaa
caaaaaaaggcagccttggtcgccattatcaacagttataaccaacaattttgcactaac
cacaacattaatgaatttgacttgtactaccaagatgtacaacagcgtattaaagatcaa
aaatacagcaatgcagactacccccataaaaacaaaattgacatcatcatagtggttgat
atgttgctcactgggtttgactctaaatatctcaacaccttatatgtcgataaaaacctt
aaatatcatggcttaattcaagcgttttcacgaacaaatcgagtgctcaacgacagcaag
ccttgggggaatattctagattttcgcggtcaagaaaaacaagttaatcaagcgattgag
ctattttcaggggcagctaaagatcgcgctaaagagatttggctcgtagagtccgcccct
gttgtggttaaaaaataccaacaagctattacagagctgcaaacctttatgcaaagtaaa
ggccttgattgcacgccttcggctgtagcaaatttaaatggcgatacagcgaaagccgaa
tttattaatcactttaaagaagtgcaaaagcttaaaactcaaattgagcaatataccgag
ctcgacgatgcgcaattacaaaccgttgaagccgccatgcctattgatagtcttcgaggt
tttaaaggggtttacctcgaaaccgccaaaggcctcaaacgtaagcaagaccaaaataat
ggtgagttagataaaactattgaacagctcgagtttgagtttgtcttatttgcctctgca
ctcatagattacgactacatcatgggcttaattgcccagtctacacaagcggcaggccaa
ggtgccagtaaacacaaaatgacccgccaagaactgattgatttaatcagttcacaggct
aatttaatggaagaacgcgacgacattattgcctacatagaacacctgccagcaggtgtt
gccttgaatgtagagcaaatcaaaatcggcttccaaaagtttaaggcagctaaagccgcg
actgaattaaatcaaatggccataaactatgacctcaccccacaaagtttaaaagacttt
gttgataatataatgaagcacatgatttttgacggtgaacaacttagcgatttacttgcc
ccgcttgatttgggctggaaagcgcgtacccaaaaagagctcgcgttaatggaagactta
atcccctatttacacaagctcgcccaagggcgggaaatttcagggcttgcagcgtatgaa
taa

DBGET integrated database retrieval system