Shewanella baltica OS117: Sbal117_4139
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Entry
Sbal117_4139 CDS
T02013
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K10943
two-component system, response regulator FlrC
Organism
sbs
Shewanella baltica OS117
Pathway
sbs02020
Two-component system
sbs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sbal117_4139
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sbal117_4139
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sbs02022
]
Sbal117_4139
02035 Bacterial motility proteins [BR:
sbs02035
]
Sbal117_4139
Two-component system [BR:
sbs02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Sbal117_4139
Bacterial motility proteins [BR:
sbs02035
]
Flagellar system
Flagellar assembly proteins
Others
Sbal117_4139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
AAA_16
AAA_2
AAA
MCM
AAA_19
AAA_3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AEH15795
LinkDB
All DBs
Position
complement(4769451..4770752)
Genome browser
AA seq
433 aa
AA seq
DB search
MGGLSIRIEGLNISAELACTIAQGDFYLWNDAMESSWLTIVNLSDCRPCDVKSYLARFPC
RNIVALLAPEQGELAAAAMRAGVQDYLLIPVETEQLLASIQRLRRLELPDSSLVVSAAVS
RQLLMLAHRAATTEASVLLLGESGTGKEPLARYIHRHSSRSHKPFVAINCAAIPESILES
VLFGHVKGAFTGAICDKAGKFEQANGGTLLLDEIGEMPLPLQAKLLRVLQEREVERLGGQ
HAIPLDIRIIASTNRDLRQAVEFGHFREDLFYRLDVLPLKIAPLRERKADILPLAEHFLG
LYGQSDNASRCYFSEHARQVLVTYDWPGNVRELENCIQRALVMRRGQAIQVAELGLNIQE
ETLELEPLGATVGLKASKQQAEFQYIIDVLKRFNGQRTLSAQALGMTTRALRYRLVQMRE
AGIDIETLLDQAA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtgggtggcctaagtatacggattgaaggattaaacatatctgcggaacttgcatgcaca
atcgcacagggagatttttatctgtggaatgatgcaatggagtcgtcttggctcacgatc
gttaacttatcagattgtcgtccttgtgatgtaaaatcttatcttgcccgttttccttgc
cgtaatattgtcgcgttattagcgccagaacaaggtgagttagccgcggcggcaatgcgt
gctggtgtacaagattatctattaattcccgtagaaaccgagcaactgctagcctcaata
caacgtttacgccgtttagagttacctgattctagtttggttgtatcggctgctgttagc
cggcaactattgatgttggcccatagggcagcaaccactgaggccagtgttttattattg
ggtgaaagtggtactggcaaggagccgcttgctcgttatattcatcgtcattcttctcgt
tctcataagcctttcgttgcgattaactgcgccgccatccctgaaagtattcttgaatct
gtcttatttggtcatgttaaaggcgcctttactggtgctatttgcgataaagcaggcaaa
tttgagcaggcaaatggcggcactttattactcgatgaaattggtgaaatgcccttgccg
ttgcaggcaaaattactccgagtgttacaggagcgtgaagtcgaaagactcggcgggcag
catgctattccactggatatcagaatcattgcctctaccaatcgcgacttaagacaggcc
gttgagtttgggcattttagggaggatctgttctaccgtttagatgttttgcctttaaaa
atcgcgcctttaagagaacgtaaggctgacatcctccctttagctgagcatttcttaggt
ttatatggtcagtccgataacgcaagtcgttgctatttcagtgagcacgcaaggcaagtg
cttgttacctatgattggccgggaaatgttagagagctagaaaattgtattcagcgggca
ttagtgatgcgcagaggtcaggctattcaagttgctgaactcggattaaacattcaagaa
gaaacgctcgagttagagcctttgggcgcgacggtaggacttaaagcttcaaaacagcag
gcagaatttcaatatattattgatgtacttaaacgttttaatggacaacgcactttaagt
gcgcaggcgctagggatgacgactagagccttaagatatcgcctcgtgcaaatgcgagaa
gcagggattgatattgaaacgttattagatcaagcagcgtga
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