Shewanella baltica OS117: Sbal117_4154
Help
Entry
Sbal117_4154 CDS
T02013
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sbs
Shewanella baltica OS117
Pathway
sbs00300
Lysine biosynthesis
sbs00470
D-Amino acid metabolism
sbs01100
Metabolic pathways
sbs01110
Biosynthesis of secondary metabolites
sbs01120
Microbial metabolism in diverse environments
sbs01230
Biosynthesis of amino acids
Module
sbs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sbal117_4154
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sbal117_4154
Enzymes [BR:
sbs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Sbal117_4154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AEH15810
LinkDB
All DBs
Position
complement(4783773..4785017)
Genome browser
AA seq
414 aa
AA seq
DB search
MDHFLYQQNALHAEGCQVADLAQTYGTPLYIYSRATLERHWHAFNNAVADHPHLICYAVK
ANANLAVLNVLARLGSGFDIVSGGELARVMEAGGDPAKVVFSGVGKTAAEMEQALNLGIY
CFNVESSAELELLNLVAGRLGKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEI
VFARAHALPHLKVKGVDCHIGSQLTEIKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGL
GVTYDAETPPHPDVYAAAILARLGDRQLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRF
AIVDGAMNDLIRPALYSAWQNIIPVVPRDSEAYEFDIVGPVCETGDFLGKNRQLALAAGD
LLAVRSSGAYGFAMASNYNTRPRAAEVMVDGEQAFLVREREKLSQLWQGEQLLP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttggatcactttctctaccaacaaaatgccctgcacgccgaaggctgccaggttgccgat
ttagctcaaacctatggcacaccgctgtatatctattcccgcgccacgctagagcgccat
tggcatgcttttaataatgccgtggcagatcatccacatttgatttgttacgcggttaaa
gccaatgcgaacttggctgtactgaatgtgctggcacgtttaggcagtggttttgatatc
gtgtcgggcggtgagttagcaagagtgatggaagcgggcggcgatcccgctaaagtggtg
ttctctggcgtgggtaaaactgcggctgaaatggaacaggcacttaatctgggcatttat
tgctttaacgttgaatcgagcgctgagcttgagctgttaaatctggtcgcaggtcgttta
ggtaaagtcgcgcctgtgtccctgcggattaatcccgatgtggatgcgggaacccatccc
tatatttcgactggccttaaagaaaacaaattcggtattgctatggatgaggctgaaatc
gttttcgcccgtgcccatgcgttgccacatttaaaagtgaaaggtgtcgattgccatatc
ggctcacaactgactgaaatcaagccattccttgatgcgatggatcgtatgctcgccttg
atcgaccgtttggccgagcagggtatcgttattgagcatttcgatgtgggtggcggttta
ggggtgacctatgatgccgaaacgccgccacatcctgatgtgtatgctgccgccatattg
gcgcgtttgggcgaccgtcaactgaagcttatcttcgagccgggccgtgcgattgccgcc
aatgcggggatttttgttactcaagtgctgtatcttaaagaaaacagcgacaaacgtttt
gcgattgtcgatggcgcgatgaatgacttgattcgtcccgcactttacagtgcatggcaa
aatattatcccagtcgtgccaagggactcagaagcctatgagtttgatattgttgggcca
gtgtgcgaaaccggtgactttttaggtaaaaatcgccagctcgcgttagccgcgggtgat
ttactggcggtgcgttcgagtggtgcctatggttttgccatggcctctaactacaacact
cgtcctcgtgcggctgaagtgatggtggatggtgagcaggctttcttagtgcgtgagcga
gaaaaattgtctcagctctggcaaggtgagcaactcctgccgtaa
DBGET
integrated database retrieval system