Shewanella baltica OS117: Sbal117_4548
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Entry
Sbal117_4548 CDS
T02013
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbs
Shewanella baltica OS117
Pathway
sbs03420
Nucleotide excision repair
sbs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sbal117_4548
03430 Mismatch repair
Sbal117_4548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbs03400
]
Sbal117_4548
Enzymes [BR:
sbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sbal117_4548
DNA repair and recombination proteins [BR:
sbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sbal117_4548
MMR (mismatch excision repair)
Other MMR factors
Sbal117_4548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_22
Viral_helicase1
HDA2-3
YCII
SWI2_SNF2
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEH16186
LinkDB
All DBs
Position
pSBAL11701:complement(1873..3651)
Genome browser
AA seq
592 aa
AA seq
DB search
MGATKDQSLVINSDGNTLVCALPGSGKTYVLIALTEKLLASDKDYSIHLLTFTDAGRVEL
TERLHKTLSTRDLSRVIVSTFHSTALSMTKKKLNRRLLMNNELTLFVKSVLNEADHLDLV
CRDSIKVHALQRLFDEMGRKQNHEEDYSHTDIALYELYKTMMYNQGKTDFNIICQLAVSW
LAQNEIEPVRATHILVDEFQDTDELQYMWLREHALKGKKLVVVGDDDQAIYSFRGGQGYS
NMVAFQQEFDADAYVLRDCFRCSKEVLKKAGKLITYNNPNRIDKPMNAVREDVGTVTIVK
AGSPDNQLDLIYNAISQSPHTWAVIARNNIMLDAVEGIIQGHNIPYNRKGGKSFFDGVAP
YSLIQLSAVITGRYDEQTLQRALSSIALPTVEITRLIQSCRQANCTFGNLKASDIGNNRD
AIKLHALAEGWQDIPAGQEERKKIYMEKVVKILQFHLDKRDMKHAEAIGKVIGARNWESL
GESIKKLAASLDGRKKRNDGDTEPKLTLITMHSSKGLQFDNVWITCAEDGGIPSKEALTE
GKEEEERRLLYVAMTRAIYNLHMSYAVKPSVFLYEIDEERVHDLESNENDTN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaacaaaagatcaatcgttagtaattaacagtgacggcaatacgctagtttgt
gcattgccgggttctggtaagacttatgttttgattgctctcacggaaaaattgttagcg
agtgacaaagattattcgattcacctactgacttttactgacgcaggtagagtcgaacta
actgaacgcctgcataaaacactttcaactcgcgatctgagcagggtcattgtcagtacg
tttcatagcactgcattatccatgaccaagaaaaagctaaaccgccgtttacttatgaac
aacgagctaactctattcgttaagtcggttctaaatgaagccgatcacttggatttagtg
tgcagggatagcattaaagtacatgccttacaaagactttttgatgaaatggggcgtaag
caaaaccacgaagaagattattcgcatactgacattgcgttgtacgaactttacaaaacc
atgatgtacaaccaaggcaagactgatttcaatattatttgtcagctcgccgttagctgg
ttagctcagaatgaaatagaacccgtccgcgcaacgcatattttggttgatgaatttcaa
gatactgatgaactgcaatatatgtggcttagggagcacgcactaaaaggaaagaagttg
gtagtcgtaggtgatgatgaccaagctatttattcattccgaggcggtcaaggctacagt
aatatggtggcattccagcaagagtttgacgcggatgcttatgtactaagagactgcttt
cgctgcagcaaagaagtcttaaaaaaggctggtaaattgattacctacaacaatccgaat
cgcattgataagccgatgaacgcggtaagagaggatgttggtactgtcacgattgttaaa
gccggttcgccggataatcagcttgatttgatatataacgcaatcagtcaatcaccccac
acatgggctgttattgcgcgtaacaacatcatgttagatgctgtagagggcattattcag
ggccacaacatcccgtataaccgcaaaggggggaaatccttttttgatggtgttgcgcct
tatagcctcattcagctttcagcagtgataacaggtcggtacgatgagcaaaccctgcaa
agagcattatcctcaatcgcattaccgactgtggagatcacgaggcttattcaatcttgt
aggcaagcaaactgtacgtttggaaatctaaaagccagtgacataggcaataaccgtgat
gcaataaaacttcatgctcttgccgaagggtggcaggacatacccgctggacaagaggaa
cgaaaaaaaatctacatggagaaagttgttaaaatattgcagttccacctagataagcgt
gacatgaaacatgcagaagcgatcggtaaagtcataggcgctcgcaattgggaaagtctt
ggtgaaagcatcaaaaaactagccgcctcgctcgatggtcgtaaaaagcgcaatgatggc
gatactgaaccaaagctaactcttatcaccatgcactcatccaaagggctgcaatttgat
aacgtctggatcacttgcgcggaggatggcggcatacccagtaaagaggctttaactgaa
ggtaaagaggaagaagaacggcggcttctatacgttgctatgacaagggccatttataat
ctgcatatgagctatgcagtgaaaccaagtgtttttctgtatgaaattgatgaagaaagg
gtgcatgatcttgaatcaaatgaaaatgacaccaattga
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