KEGG   Shewanella baltica OS117: Sbal117_4747
Entry
Sbal117_4747      CDS       T02013                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
sbs  Shewanella baltica OS117
Brite
KEGG Orthology (KO) [BR:sbs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sbs02048]
    Sbal117_4747
Enzymes [BR:sbs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Sbal117_4747
Prokaryotic defense system [BR:sbs02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Sbal117_4747
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 HSDR_N ResIII DEAD HSDR_N_2 SNF2-rel_dom
Other DBs
NCBI-ProteinID: AEH16378
LinkDB
Position
pSBAL11702:63795..66908
AA seq 1037 aa
MTTYKAVAESNNFIVLDKYTKEWQVNESFQSEGDLERELIQDLSNQGYEYLSALTTPDAM
LANVRKQLQALNKVEFTDVEWARFCEQYLNTPSDNILDKTRKVHSDYIFDFVFDDGHIEN
IYLFDKKTIARNKVQVIKQFEQTGSHANRYDVTILINGLPLVQIELKKRGVAIREAFNQI
HRYSKESFNSDHSLYKFLQLFVISNGTDTRYFANTTKRDKNSFDFTMNWAKSDNTLIKDL
KDFTATFFQKETLLEVILRYSVFDVSNTLLVMRPYQIAATERILWKIKSAFNAKNWSSTE
SGGYIWHTTGSGKTLTSFKAARLATDLDCIDKVFFVVDRKDLDYQTMKEYQRFSPDSVNG
SDSTAGLKSNLDKDDNKIVVTTIQKLNNLIKSESDLAIYNKQVVFIFDECHRSQFGEAQK
NLKKKFKKYYQFGFTGTPIFPENALGAETTGSVFGQQLHTYVITDAIRDEKVLKFKVDYN
DVRPQFKSIETEQDDKKLSAAENKKAFLHPMRIGEISQYILSHFNQKTHRAYSGAKGFNA
MFAVSSVDAAKAYYETFKTLQAEAENGPTSKPLRIATIFSFAANEEQDAIGDILDESFEV
SSLNSSAKEFLSAAITDYNAMFKSNYGVDSNGFQNYYRDLAQRVKNQEIDLLIVVGMFLT
GFDAPTLNTLFVDKNLRYHGLMQAFSRTNRIYDATKTFGNIVTFRDLEQATIDAITLFGD
KNTKNVVLEKSYKEYMEGFNDIATGQARRGFVDIVKELQERFPNPENIEKEQDKKEFAKL
FGEYLKAENILQNYDEFAGLKALQSLDTSDEQAVEEFKSKYYLDDADIEAMQTIDMPSER
AIQDYRSTYNDTRDWLRRDKEGQDKDKSTVDWDDVVFEIDLLKSQEINLDYILELIFDHN
KKNKSKEGLIEEVRRMIRGSLGNRAKESLVVDFINQTNLDEINDKASIIDAFFKFAQAEQ
KREADAIIASEKLNIDAAKRYIASSLKREYASENGTALNEALPKLSPLNPQYRTQKQTVF
QKIAAFVEKFKGVGGQL
NT seq 3114 nt   +upstreamnt  +downstreamnt
atgacgacttataaagcggtggcagaatccaataactttattgtgttagataaatacact
aaagagtggcaggttaacgaaagctttcaaagcgaaggtgatttagaacgtgagctgatt
caggacctaagcaaccagggctatgagtatttatcggcactaaccacgcccgatgccatg
ctggcgaatgtgcgcaagcagctacaagcccttaataaggtcgaatttaccgatgtcgag
tgggctcgcttttgcgagcaatacctgaacacaccaagcgacaatattcttgataaaact
cgcaaagtgcacagtgactatattttcgattttgtctttgatgatggccatatagaaaac
atctacctgtttgataagaagaccattgctcgtaacaaagtgcaggtcattaagcagttt
gagcaaacgggaagccatgccaaccgttacgatgtgacgattttgatcaatggtttgcct
ttggtgcaaatcgaactgaaaaagcgtggtgtggcgatccgtgaggcgtttaatcaaata
catcgctacagcaaagaaagctttaatagcgatcactccttgtacaagttcttgcagctt
tttgtgatctctaatggcaccgacacgcgctattttgccaataccaccaagcgcgacaaa
aacagcttcgattttacgatgaactgggcgaagtcagacaatacgctgatcaaggattta
aaagactttaccgccacttttttccagaaagagaccttgcttgaagtgatcttgcgttac
tcggtgtttgacgtcagcaataccttacttgtaatgcgcccttaccaaattgcggctact
gagcgcattttatggaagataaagagcgcgtttaacgctaagaactggagcagcaccgag
agcggtgggtacatttggcacactacgggttcaggcaaaacactcaccagctttaaagcg
gcacgtttggccaccgatttagactgtatcgataaagtcttctttgtggtggaccgaaaa
gacctcgactatcagacgatgaaagagtatcagcggttctcgcctgatagtgtgaacggt
tcagacagtaccgcagggcttaagagtaacctggataaagacgataacaagattgtcgtc
accacaatccaaaagctcaacaacttaatcaaaagcgaaagcgatttagctatatacaac
aagcaagtcgtttttatttttgatgagtgtcatcgaagccagttcggtgaggcgcagaaa
aacctgaagaagaaattcaaaaagtactaccagtttggcttcacaggtacgcccattttc
ccagaaaatgcactgggcgcagaaaccacgggtagcgtgtttggccagcagttgcacacg
tatgtgatcaccgatgccattcgtgatgaaaaagtactcaagttcaaagtggactataac
gatgttcgtccgcaatttaagagcattgagactgagcaggatgataagaagcttagtgcg
gcggagaataagaaagccttcttacatccaatgcgcattggtgaaatctcgcagtatatt
ctgagccattttaaccagaaaacgcatcgagcctattctggcgccaaagggtttaacgcc
atgtttgcggtcagtagtgttgatgcggcgaaagcctactatgaaacctttaaaacattg
caggccgaggccgaaaatggacccacaagtaaacctctgcgcattgcaactatcttctca
tttgctgccaatgaagagcaggatgccattggtgatattttagatgagagctttgaagta
agtagcctgaacagcagcgcaaaagagtttttgagcgccgcgattacggattacaacgcc
atgtttaaatctaactatggcgtggacagtaatggctttcagaactactaccgtgacctt
gcccaacgagtgaagaatcaagaaatagatctgctcatagtggtggggatgtttttaacg
ggctttgatgcgcctacgcttaataccctgtttgttgataagaatttgcgctatcacggc
ttgatgcaggcattttctcgcactaaccgcatttatgatgcgacgaagacctttggcaat
attgttaccttccgtgatttggagcaggcaaccattgatgccattactttgtttggtgac
aaaaacaccaaaaacgtggtgttggagaagagctacaaagaatacatggaaggttttaac
gatattgcgactgggcaggcgcgtcgaggttttgttgatatcgtcaaagagctgcaagaa
cgctttccaaacccagaaaatattgaaaaagaacaagataaaaaggaatttgccaagcta
tttggtgaatacctcaaagcagaaaatattttacaaaactacgatgaatttgctggcttg
aaggcactgcaaagccttgataccagtgatgaacaagcggttgaagagttcaagtcaaag
tactatctggacgatgctgacatcgaggcaatgcaaaccatcgatatgccgagcgaacgt
gctattcaagattatcgctctacctataacgatacccgcgactggttacgccgcgataaa
gaaggtcaggacaaagataagtcaacggtagactgggacgatgtggtctttgaaattgat
ttgcttaaatcccaagaaatcaacctcgattacattctggaactgatttttgatcacaat
aagaagaacaagagcaaagaaggcttgattgaagaagtccgccgtatgattcgtggtagc
cttggtaatagagcgaaagagagcttagtggttgattttattaaccagacaaacctagat
gagatcaatgacaaagccagcattatcgacgccttcttcaagttcgcccaggcggagcag
aagcgcgaagccgatgccattattgcctctgaaaagctcaatatcgatgctgccaaacgt
tatattgcatcatcactcaaacgtgagtacgcctctgaaaatggcactgctcttaatgag
gcgctgcccaaacttagcccattgaacccacagtaccgaacccagaagcaaacggttttt
cagaaaattgccgcttttgttgaaaaattcaaaggtgtgggtgggcagttgtag

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