Shewanella baltica OS678: Sbal678_0465
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Entry
Sbal678_0465 CDS
T01725
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
sbt
Shewanella baltica OS678
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbt03400
]
Sbal678_0465
Enzymes [BR:
sbt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Sbal678_0465
DNA repair and recombination proteins [BR:
sbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Sbal678_0465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ADT92664
LinkDB
All DBs
Position
complement(524371..525936)
Genome browser
AA seq
521 aa
AA seq
DB search
MQLQQFHTVRLILGDQLNAQHSWFNRVDDQVLYMIAELHQENTYVTHHVQKICAFFAAMA
QFAQELRAQGHQVLYLTLDDTFNNTQGYSDLLGLIQHQVTLVGAIKFEYQRPDEYRLLEQ
LSQLKLNTAAVNCVDTEHFIVPFDEIDAQFPVGKHIMMEHFYRRMRKRFNILMQDGKPLG
GQWNFDASNRQKLKTQDIKVLPEPLMFSLDVTEILARLERHQIPTMGRIDAPLLWPINRA
QSLTLLTYFCQVCLPSFGRFQDAMTAQHPAKWSLYHSRLSFSLNSKLISPLEVINAAIDS
YQTNAEIDIAQVEGFVRQILGWREYVRGIYWANMPQYASTNALNAHGTLPDYFWHGDTKM
NCMRQALSQSLDFAYAHHIQRLMVIGNFCLLTEIEPNQVDEWYLGVYVDAIEWVEMPNTR
GMALFADGGIVGTKPYAASGSYINKMSDYCSGCHYKIKERSGALACPFNSFYWRFMDKHR
ARLSQNPRIGMLYQTWDKMDESVRHAILATAEHNLVHLNRL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcaattacagcaattccatacagtcaggttaattttaggcgatcaactcaatgcccag
cattcttggtttaaccgggttgatgatcaagtactgtatatgattgcagaactgcaccaa
gaaaacacttatgtgacccatcatgtgcaaaagatatgcgccttctttgcggcaatggcg
caatttgcccaagagctgcgggcgcaagggcatcaagtgctctatctcacccttgatgac
accttcaataacactcagggctatagcgatctactggggctcattcaacatcaagtgacg
ctggttggcgcaataaagtttgaataccaaaggccagatgaataccgcctgcttgagcaa
ttgagtcagcttaagctcaacaccgccgcggtgaactgtgtcgatacagaacactttata
gtgccgtttgacgaaatcgatgcgcagttccccgtcggcaaacacattatgatggagcac
ttttatcgccgtatgcgtaaacgcttcaacatcttgatgcaagacggaaagccactcggt
gggcaatggaactttgatgccagcaaccgtcaaaagcttaaaactcaggatataaaagtc
ttgcctgagccattaatgtttagcctcgatgtaactgaaattctcgctaggcttgagcgt
caccaaatcccgaccatgggtcgcattgatgcgccattgctgtggccgataaaccgtgcg
caaagcctcacactattaacgtatttttgtcaggtttgcttgccttcctttggccgcttt
caagatgccatgacagcgcaacatcccgccaagtggagcttgtaccatagtcgactatca
ttcagccttaacagcaaattaatcagtccgttagaagtcatcaatgcggctatcgacagc
tatcaaaccaatgctgaaattgatatcgcccaagtcgaaggatttgtgcgacagatatta
ggttggcgagaatacgttcgcggcatttactgggccaatatgccgcagtacgccagcact
aacgcgctcaatgcccatggaacgctgcccgattatttttggcatggcgacactaagatg
aactgcatgcggcaagcgttatcccaatcattagattttgcctacgcccatcatattcag
cgcttaatggtgatcggcaatttttgtttattaactgaaatcgagccaaatcaagtcgat
gagtggtatttaggcgtgtatgttgatgccatcgaatgggttgaaatgcccaacactcgc
ggcatggccttatttgcagacggcggtattgtcggcacgaaaccctacgccgccagcggt
tcctacatcaataaaatgagtgattattgcagcggctgtcattacaagataaaagagcgc
agcggcgcactcgcctgcccgttcaatagcttttattggcgctttatggacaaacaccgc
gcgcgattgtcgcagaacccaaggatcggcatgctataccaaacttgggacaaaatggac
gagtccgtaaggcacgccatattagccacggccgaacacaatcttgttcatctaaaccgt
ttgtaa
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