Shewanella baltica OS678: Sbal678_0503
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Entry
Sbal678_0503 CDS
T01725
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sbt
Shewanella baltica OS678
Pathway
sbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sbal678_0503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbt03400
]
Sbal678_0503
Enzymes [BR:
sbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sbal678_0503
DNA repair and recombination proteins [BR:
sbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sbal678_0503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
WHD_PriA
Zn_ribbon_PriA
AAA_30
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
ADT92700
LinkDB
All DBs
Position
complement(563037..565232)
Genome browser
AA seq
731 aa
AA seq
DB search
MSLFVEVALPVPMRQTFSYRVPETYPSTPQIGVRVKVPFGRQQLIGLVTGITDTCSLAPK
QIKSVLEFIDDKPLLPESLYKLTLWAARYYFCSQGQMLTQALPVALRKGLDAAPQKIQFW
QLTEIGQNIAPEAVKRAPAQKKLLELLKPASLTQEEVISLDISKAALKALEDKGWVARHE
KIAELNLDWRTTLEMDETPHKLNKEQAVAVATLNLQQGYHCTLLEGITGSGKTEVYLAVL
EEILKQGKQALILVPEIGLTPQTINRFKRRFKVNVAILHSGLTDNQRLEAWRQARCGQAA
IIIGTRSALFTPMAYPGIIILDEEHDSSFKQQEGVGYHARDLAVMRGHLESIPVILGTAT
PSLESLQNALSGRYHHLQLGERAGSAKKVRQGIIDIKNMPLKAGMSVPLLNEIRLHLDAG
NQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEICCHHCGNQYAIPKQCHK
CGSTMLMGQGIGTEQLAEALQLEFPKHPVVRIDRDTTRLKGSLETHLNAIHKGEYKILVG
TQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVAGRAGRASKPGTVLLQT
HQSDNPILRDLLHRGYGEFARSQLKERQQALLPPVWHMVLVRAEAHLASDADNFLNAFAA
LLPQDKEFEVIGPMPAPLDKKAGKFRRQLLFQAKNRNRLQQEFERIHPLVEQLIEAKRCR
WSLDRDPQDLL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgtttgtcgaagttgcgttacctgtgcctatgcggcaaacctttagctaccgc
gtacccgaaacttatcctagtacaccgcagataggcgtgcgcgttaaagtccccttcggt
cgtcaacaattaatcggattagtcacaggtatcactgatacatgtagcttagcgcctaag
cagattaagtctgtgcttgagtttatcgacgataaacctttgttgcctgaatcactttat
aaattaaccctttgggccgcgagatactatttttgcagccaagggcagatgctaacccaa
gccttacctgtggccctacgtaaagggctcgatgccgcgccgcaaaagatccaattctgg
caattaactgagataggccaaaatattgcgccagaagcggttaagcgagcacccgcacag
aaaaaattactcgagttactcaaacccgccagcttaacccaagaagaagtgatcagctta
gatatcagtaaagcggcactgaaagccctagaagataaaggctgggtggcacgccatgaa
aaaattgccgagcttaacctcgactggcgcaccacactcgaaatggacgaaacgccgcat
aaactcaataaagaacaagccgtcgccgttgccactttaaatctgcaacaagggtatcac
tgtactttattagaaggcattaccggttcgggtaaaacggaagtctatttggcggtgctg
gaagaaattcttaagcaaggcaagcaagcgttaattttagtgcctgaaatcggtttaaca
ccccagacaatcaatcgctttaagcgccgttttaaagtcaatgtcgccatattgcactca
gggttaaccgacaatcaaagactcgaagcttggcgccaagcccgctgcggtcaggccgcc
atcattatcggcacccgctcggccttgttcacgccgatggcctatcccggcatcatcata
ctcgatgaagaacacgacagtagcttcaagcaacaggaaggtgtcggttatcacgcccgc
gacttggcagtcatgcgtggccatttagaatcaattcctgtgatattgggcacggcaacc
ccctcactcgaaagtctacaaaatgccttaagtggccgttaccatcatttgcaattgggt
gagcgcgctggctcggctaaaaaagtgcgccaagggattatcgacattaaaaatatgccg
ttaaaagcaggaatgtcggtgccgctgctgaacgaaatccgtctgcatttagacgcaggc
aaccaagtattactgtttctcaatcgccgcggcttcgcaccagccctgctttgtcacgag
tgtgggcacttacacgagtgcgaccgctgcgacgcgtttttcacagttcatcaatccctt
ggtgaaatttgctgccaccattgtggcaatcaatatgccatccctaagcaatgccacaaa
tgcggtagcactatgctgatgggccaaggtataggcacagagcaactcgccgaggcactg
caactggagtttccgaaacatccagtagtgcgcatcgaccgcgataccactcgcttgaaa
ggctcactagaaacccacttaaacgcaattcataagggcgaatataaaatcctcgtcggc
acgcaaatgctggctaagggtcatcacttccctgatgtgacgcttgttgggctactcgat
gtcgatggcgccttatttagcgccgactttcgcgcgcccgagcgttttgggcagctctat
acccaagtcgccggtcgtgcgggccgtgccagtaaacccggcacggtattattgcaaact
caccagagcgacaatcccattttgcgggatttactgcaccgcggttatggcgagtttgct
cgcagccagttaaaagaacgtcaacaagcactgctgccgccagtatggcacatggtgttg
gtgcgcgccgaagcccatttagccagtgatgccgataactttctcaacgccttcgccgcg
cttttgccgcaagataaagaatttgaggtaattggtcctatgccagcgcccttagataaa
aaagccggcaagttccgtcgccaactgctattccaagctaaaaaccgcaaccgtctgcag
caagagtttgaacgtattcatccgcttgtagagcagcttatcgaagccaagcgctgccga
tggagcttagacagagatccgcaggatctcctctga
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