Shewanella baltica OS678: Sbal678_0673
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Entry
Sbal678_0673 CDS
T01725
Name
(GenBank) Microbial collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
sbt
Shewanella baltica OS678
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbt01002
]
Sbal678_0673
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
sbt02042
]
Sbal678_0673
Enzymes [BR:
sbt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
Sbal678_0673
Peptidases and inhibitors [BR:
sbt01002
]
Metallo peptidases
Family M9
Sbal678_0673
Bacterial toxins [BR:
sbt02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
Sbal678_0673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
PPC
T4_Rnl1_C
Motif
Other DBs
NCBI-ProteinID:
ADT92858
LinkDB
All DBs
Position
complement(794049..797261)
Genome browser
AA seq
1070 aa
AA seq
DB search
MRFDASFGSTHQITPKEDLLCRLDNYGYTMKNTLLFAAISLAFATPALAHDTHTSHPLGS
NTPSNPQAQPAPRPPSAPISQIESHRPLLRETPLMASPNEPTMTEQTMTEPPKMHSRKKR
EVSEQPPLKLQSRSAALQSNDCSDFVGKSGQALVDQLSQSTPECVGKLYSLKGSAATALF
SEANVISVANAIATKAKDYTGVDVQHLESHIYFVRAALYVQFYSPNDVPAYSSAAKASLK
SALNALFANAAIWTVSDDNAGVLKEALILIDSAELGADFNHATIKVLMDYDANWQASFAM
NAAANSVFTTLFRAQWNDDMQALFARDQGILDALNNFQLEHRDLLGTNAEYLLVNSVKEL
SRLYYIDSMRPRVTQLVKNILSSTSKTEPSKVLWYAAAEMADYYDRSHCNDYNICGFKAQ
LEADTLPFNWKCSDSLKIRAQDLYQDQAKWACDVLTSQESYFHSKLETGMQPVGQDNNDD
LELVIFGSSSEYKSLANSIFGINTDNGGMYLEGSPAGLKNQARFIAYEAEWRTPDFHVWN
LQHEYVHYLDGRYNLFGDFSRGTSANTIWWIEGLAEYISYRDANTAAIAMGETGEFMLST
IFKNNYESGQDRIYRWGYLAVRFMFEHHRDDVRQILAYLRNDQYAEYQTFMDGIGTRYDN
EWQGWLASGLSTADDGIVDKGPSDVDAEPSGREGNWTGPAGTISKDYSPCQVTNEAYRYT
ESASLKIDVPMECIDSKLGRASFSFTNTERSAQDLWIKIGGGWGDADIYFNSKSWASPEQ
NQGAGIGNGNYQVIKVQLNPDEYWHYITLSGDFGGVDMQVSTTELFADVDPDLGDGGVDP
EPPANCGAVTLDYGQLTLGKNECISGGRNSFYFWVEEDNTQFTVTTKGGSGDANLYFNAS
QWADADNADAKSTQAGNQESLSFSANRGWRYITVDTATEFSGVTLTLNTGASNTPTPALI
ANACTTQSPLSHGELSSGKAICTADGRSDYYLWVPEGTSQLSINSAHGSGDVSLFSGTTW
ANAQHFDAASVTPANTQESITVDAPNVGWYYITVQSEPQSSGVALQVDLR
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttgatgcaagctttggttccacgcatcaaataacgcccaaggaagatctgctt
tgcagactagataactacggatacacaatgaaaaacacactgctcttcgcagctattagc
ttagcttttgcgactcccgctctcgcccatgacactcatacgagtcacccattaggcagc
aacacacccagcaatccacaagcgcaaccggcaccacgaccaccctcggcgcccattagc
caaatagaatcccatagaccgctactgcgggagacgccattgatggcatccccgaatgag
ccaactatgacagaacagacaatgacagaaccgcctaagatgcattcacgcaagaagcga
gaagtatctgagcaaccgccacttaagttacagagtcgcagcgccgcactgcagagcaat
gactgcagtgactttgtcggtaaatcgggccaagccctagtggatcaattgagccaatcg
acacccgaatgcgtcggtaagctctatagcctcaaaggcagtgctgcgaccgcgctattt
agcgaggccaatgtgatcagtgtcgccaacgccattgccactaaagccaaggactacact
ggggtcgatgttcagcatcttgaatcgcatatttactttgtccgcgcagccctctatgtg
cagttttacagcccaaatgatgtacccgcttacagcagcgccgctaaggccagcttaaaa
tcggccctcaacgctttatttgccaacgctgcgatttggactgtctccgatgacaatgct
ggcgtgttgaaagaagccttaatcctgattgactctgccgagctcggcgccgatttcaat
catgccaccattaaagtgttaatggactacgacgctaactggcaagccagtttcgccatg
aacgccgctgcaaactcagtgtttactaccttattccgcgcccagtggaatgatgacatg
caggcgctgttcgctcgtgaccaaggcattttagatgcgctgaataacttccaactcgaa
caccgcgacttgttaggtaccaatgctgagtatctgttagtcaactcagtcaaagagtta
tcaagactgtattacattgattccatgcgcccgcgagtgactcagctcgttaaaaacatc
ctcagcagcaccagcaaaaccgaaccgagcaaagtgctttggtacgcggcggcagaaatg
gccgactattacgatcgcagccattgtaacgattacaatatctgtggttttaaggcgcag
ttagaggccgataccctacctttcaactggaaatgctccgacagtctcaagatccgcgca
caagatctctatcaagatcaagccaagtgggcctgtgatgtgttgaccagccaagagagc
tatttccacagcaaacttgaaacgggtatgcaacctgtagggcaagataacaacgatgat
ttagagctagtgatatttggcagttcgtctgagtataaatccttagcgaacagtatcttt
ggtatcaataccgacaacggcggcatgtaccttgagggctcgcccgccggactcaaaaat
caggcgcgttttatcgcctatgaagccgaatggcgcacgccggatttccatgtctggaac
ctgcaacacgaatatgtgcactacctcgacgggcgctataacctgtttggtgactttagc
cgcggcacatcagccaataccatttggtggattgaaggcctcgcagaatacatttcttac
cgtgacgccaataccgcggccattgccatgggcgaaaccggtgagtttatgttgtcgacc
atattcaaaaacaactatgaatcgggccaagaccgtatctaccgttggggttatctggcg
gtgcgctttatgtttgagcatcacagggacgatgtaagacagattctcgcctacctacgt
aacgaccaatacgcggaatatcaaacctttatggatggtattggcacacgttacgacaac
gagtggcaaggttggctcgccagcggcttgagcacggctgacgatggcatagtcgataaa
ggcccaagtgatgtcgatgctgagcccagtggccgtgaaggtaattggactggccctgcg
ggcactatcagtaaggattactcgccttgccaagtgacgaacgaagcctaccgttacact
gaatcggccagcctgaaaatcgatgtgccgatggaatgtattgattccaaactcggccgc
gccagtttcagttttactaataccgagcgctcggcccaagatctgtggatcaagattggc
ggcggttggggtgatgccgacatttatttcaattctaaaagttgggcaagcccagagcaa
aaccaaggcgcggggatcggcaatggtaactatcaagtcattaaagtgcagttaaaccct
gacgaatattggcactacattaccttgtcgggggactttggcggcgttgatatgcaagtc
agcaccactgagctgttcgctgatgttgatcccgatctgggagatggcggcgtggatcct
gagccaccagcaaattgcggtgcagtaaccttagattacggccagctcacactgggcaaa
aacgagtgtatcagtggtggacgcaacagcttctacttctgggttgaggaagataatacc
cagttcaccgtcaccactaagggcggctctggggatgccaatctctacttcaatgccagt
cagtgggccgacgccgataatgccgatgccaagagcactcaagcaggtaatcaagagtcg
ctaagttttagtgccaatcgcggctggcgttatatcacagtggatactgccactgagttt
agcggcgtcacactcaccctcaatacaggcgcgagcaatacgcctacgccagctctaatc
gctaatgcctgcacgacgcaatcgcccttgagtcatggtgagctgagttcaggcaaagcc
atctgcaccgccgatggccgcagcgattactatctttgggtgccagaaggtacgagtcag
ttaagcatcaactcggcccatggcagtggtgatgtgagcctgttttcggggacaacttgg
gccaatgctcaacacttcgatgcagcgtctgtcacgcccgctaacactcaagaaagtatc
acagtcgatgcgccaaatgtgggttggtattacatcacagtgcagagtgaacctcagagt
tcgggtgtcgcactgcaggttgatttacgctag
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