Shewanella baltica OS678: Sbal678_0955
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Entry
Sbal678_0955 CDS
T01725
Name
(GenBank) transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
sbt
Shewanella baltica OS678
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbt03000
]
Sbal678_0955
Transcription factors [BR:
sbt03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sbal678_0955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_30
HTH_5
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ADT93134
LinkDB
All DBs
Position
1098308..1099306
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AA seq
332 aa
AA seq
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MDKRSSSTQLKLRHLSFRLLQVYVQVVRLGNISAAARALHLTQPTVSLQLKKLADVLGEP
LLESRDGRMLPTLIGNELYRAACDTLSRFEDFDAFMQQAKGGSVGHVNIGIVTTAKYVLP
RILGAFYRQFPQVKVTLNIGNRAHVLGRFERQEDDLYLFSHPPSGDNVLSARIIKNPLQL
IAPKDHWAVGREQVNFNDLKNERFIVREPGSATRLMFESWCSGQGITLSDTMQIESNEAI
RLSVASGLGLSVISAHTLQEGREKPAILPVTGFPLESNWYLVGRKDRRLPYAAMQLVDFM
AAHLAECIEPEWVAADISELAMHFNHVPQTRS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggataagcgttcgtcatcgactcagcttaaattgcggcacttgagtttccgtttactg
caggtgtatgtgcaagtggtgcggttaggcaatatttccgcagcggcgagggccttgcat
ttaacccaacccacagtgtcattacagcttaaaaagctagccgatgtgttaggtgaaccg
ttactcgagagtcgtgatggccgcatgctaccgaccttgattggcaatgaactctaccgc
gcagcctgcgataccttgagtcgttttgaggatttcgatgcctttatgcagcaggctaaa
ggtggcagcgttgggcatgtcaatattggtatcgtcactaccgccaaatacgtattacca
cggattttaggggctttttatcggcagtttccgcaggttaaagtgaccttaaacataggt
aaccgtgcccatgtgttaggccgatttgagcgtcaagaagatgatttatacctgtttagt
catcctcctagtggcgataacgtgctatctgcgcggatcattaaaaacccgctgcaactg
attgcgccaaaggatcattgggcggtgggccgtgagcaagtgaattttaacgatctcaaa
aatgagcgttttatcgtgcgcgagccaggttctgccacccgtttaatgttcgagtcttgg
tgcagcggtcaaggcatcacgcttagtgacactatgcaaattgagagcaatgaggcgata
cgcctaagcgtcgcgtcgggcttaggcttgtctgtgatttcggcgcacacgctgcaagaa
gggcgcgaaaaaccggctattttgccggtaacgggttttccgctcgaaagtaactggtat
ctggttggccgcaaagatcgccgcttgccctatgctgccatgcagctggtggactttatg
gcggcgcatttggccgagtgtatcgagcccgaatgggttgccgccgatatcagtgaactg
gctatgcactttaatcatgtgccgcaaactcggtcttag
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