Shewanella baltica OS678: Sbal678_1291
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Entry
Sbal678_1291 CDS
T01725
Name
(GenBank) NUDIX hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
sbt
Shewanella baltica OS678
Pathway
sbt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sbal678_1291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbt03019
]
Sbal678_1291
Messenger RNA biogenesis [BR:
sbt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Sbal678_1291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
ADT93468
LinkDB
All DBs
Position
1501485..1502009
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AA seq
174 aa
AA seq
DB search
MIDSDGFRANVGIIICNRYGQVMWARRFGQHSWQFPQGGVDDGETAEEAMYRELYEEVGL
RPEHVHILTSTRSWLRYRLPKRLVRQDSKPVCIGQKQKWFLLQLKSQDSAINLSSSGHPE
FDDWRWVSYWYPVRQVVSFKRDVYRKVMKEFAVTALSFQTLEIPRKRGRQKTTG
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatagcgacggctttcgcgcaaatgtgggcattataatttgtaacagatatggc
caagtcatgtgggccagacgcttcggtcaacactcatggcaatttcctcaaggtggtgtc
gatgatggcgagacagcagaagaggcaatgtaccgtgagctatatgaagaagtgggccta
agacccgaacacgtgcatatcctaacctcgacccgttcttggttacgctatcgtttgcca
aagcgtttagtcaggcaagacagtaaacctgtgtgtattgggcaaaaacaaaagtggttt
ctgttacaactgaaaagccaagatagtgcgattaatttgagttcctctgggcatcctgaa
tttgacgattggcgctgggtaagttattggtatcctgtgcggcaagtcgtgtcatttaag
cgtgatgtttatcgtaaggtgatgaaagagtttgcggtaacggcattgtcattccagacc
ctagaaatacctaggaaacggggaaggcaaaaaacaacgggctga
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