Shewanella baltica OS678: Sbal678_1532
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Entry
Sbal678_1532 CDS
T01725
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sbt
Shewanella baltica OS678
Pathway
sbt03030
DNA replication
sbt03430
Mismatch repair
sbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sbal678_1532
03430 Mismatch repair
Sbal678_1532
03440 Homologous recombination
Sbal678_1532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbt03032
]
Sbal678_1532
03400 DNA repair and recombination proteins [BR:
sbt03400
]
Sbal678_1532
Enzymes [BR:
sbt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sbal678_1532
DNA replication proteins [BR:
sbt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sbal678_1532
DNA repair and recombination proteins [BR:
sbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sbal678_1532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADT93707
LinkDB
All DBs
Position
1799178..1802651
Genome browser
AA seq
1157 aa
AA seq
DB search
MSDPRFVHLRVHSDFSMTDGVAKVKPILAQVEAQGMAAVALTDQNNFCGLVKFYSGCHGA
GIKPIIGADFWMQVPGFEGELCALTIIAMNNVGYQNLTQIISQAYLRGQVAGRVVIDQEW
LLTYNEGILLLSGAKEGDLGKALLKGNSTQVESLCEFYQTHFADRYFLELIRTGRPDEER
YLHMAVILAQEKGIPVVATNQVVFLKPEDFDAHEIRVAIHDGFTLADPRRPKKYSEQQYL
RSEEEMCELFADIPAALANSVEIAKRCNVTIRLYEYFLPNFPTGDMSIEDFLVDCSRKGL
EERLEFLFPNPEVRAEKRGEYDERLDIELKVINQMGFPGYFLIVMEFIQWGKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAE
LYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPEPGMTLAKAFEVEPA
LQESYDGDEDVKDLIDMCRKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGKNPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALEMVNKVEVKNGREPIRIEAISLTDPACFRLL
QKYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIERKHGREE
VSYPDSQYQHESLRELLSPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFKEGAINNGVDGDLSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
QFMAAVMSADMDNTDKIVTLVDECERMGLPLIPPDVNKGLFKFTVDDDLRIVYGIGAIKG
VGEGPVESILEARKDGPFVDLFDFCARIDLKKLNKRVIEKLICAGALDNLGPHRASMMAT
LPEAIRAADQHAKAEAIGQHDMFGLLNSEPEDSKQQFVECTPWPDKIWLEGERETLGLYL
TGHPINQYLKELKHYTSGRLKDVHPTERGKTAKAAGLVVATRVMLTKRGSKMGLLTLDDK
SARLEIMLFTEAFEKFNHLLEKDRILICEGEVSYDDFAGGNRMTARNIIDISEARSHFAK
ALEIDMDGSELTPSALDTFEQALSPWRNGAVPVVINYTQAQAKGQFRLADAWRVNPTDDL
MLSLESLLGPNKVRILF
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcctcgttttgtgcatcttcgtgtccacagtgacttctcaatgaccgatggc
gtggccaaggtcaagccaattttggcgcaggtggaagcgcagggaatggcggctgtcgcc
ctgactgaccaaaacaacttttgtggtttggttaagttttacagtggttgccatggtgcg
gggatcaagccgattatcggcgccgatttttggatgcaagtgcccggatttgaaggcgaa
ttgtgcgccttgaccataattgcgatgaacaatgttggttatcagaatctgacccaaatt
atcagtcaggcctatttgcgtggccaagtggctgggcgtgtggtgatcgaccaagagtgg
ttactcacttataacgaaggcattttgctgttatcaggcgccaaagagggcgatctgggt
aaggcgttgctcaagggtaatagcactcaggttgaatctttatgtgagttttatcaaact
catttcgccgatcgttattttcttgaacttatccgtaccggtcgccccgacgaagaacgc
tatctgcacatggctgtaatcttagcgcaggagaaaggcattccagtggtcgccaccaat
caggtggtgttccttaaacctgaagattttgacgcccatgaaattcgagtcgcgatccac
gatggttttacccttgccgatccgcgccgtcctaaaaagtacagtgaacagcagtattta
cgtagcgaagaggaaatgtgcgagctatttgccgacattcctgcggcgctggcgaacagt
gtcgaaatcgctaaacgttgtaacgtgactattcgtttgtacgagtatttcctgcccaat
ttcccgacgggcgatatgtccatcgaagactttctggttgattgttcgaggaagggcctt
gaagagcggctcgagtttttgttcccgaaccccgaagtgcgcgccgagaaacggggcgaa
tacgatgagcggctcgatatcgaactcaaagtaatcaaccagatgggcttccccggttac
ttcttgatcgtgatggagttcatccaatggggtaaagataacggtatcccagtgggaccc
ggtcgtggttcgggtgcgggttcacttgtggcctatgcgctcaaaatcaccgacttagat
ccgctcgaattcgacttactgttcgaacgcttcttgaaccctgagcgtgtttccatgccc
gactttgacgtcgacttctgcatggatagacgtgatgaggttattgaccacgtggccgag
ctgtacggccgcgaagcggtatcgcaaatcatcaccttcggtactatggcggcaaaagcg
gttatccgcgacgttggccgtgtgctcggtcatccctatggtttcgttgaccgaatttct
aaactcattccccctgaacctggcatgacactggcgaaagcctttgaggtcgagccagcg
ttgcaagaatcctatgatggcgatgaagacgtcaaagatctgatcgacatgtgccgtaag
cttgaaggtgtaacccgtaacgccggtaagcacgccggtggtgtagttattgcaccaaca
aaaattaccgattttgcaccgctgtattgcgatgcagaaggcaaaaacccagtaacacaa
ttcgataaaaacgacgttgaaaccgcagggctggttaagttcgacttcttgggattaaga
accctgacgattatcgactgggcactggaaatggtgaacaaggtcgaagtgaaaaacggg
cgcgaaccaatacggattgaggcgatttcactcacggatcccgcctgtttccgtctgctg
caaaagtatgaaactacggcggtattccagctcgaatcccgtggtatgaaggatttgatt
aagcgtctgcagcccgactgtttcgaagacatgattgcactggtggcactattccgtccg
gggccgttgcaatcgggcatggtagataactttatcgaacgtaagcatgggcgcgaggaa
gtctcgtacccagattctcagtatcaacatgaatcgcttcgtgagctgttatcgccgacc
tacggcattattctgtatcaagagcaggtgatgcagattgcgcaggtgctgtcgggctac
acccttggcggtgccgacatgctgcgccgtgctatgggtaagaaaaagcccgaagagatg
gccaagcagcgcagtatctttaaagaaggcgcaatcaataacggcgtcgatggcgacttg
tcgatgaagatcttcgacttagtggaaaagtttgccggctacggttttaacaaatctcac
tccgccgcttatgcgctggtttcctatcagaccttatggcttaaaacccattttcctgcg
cagtttatggcggcggtaatgtcggccgatatggataacacagataaaattgtgaccttg
gtcgatgaatgtgaacgcatgggcttgccgcttattccgccggatgtgaacaaaggtttg
ttcaaatttaccgtcgatgatgatctgcgcattgtttatggcatcggcgccattaaaggc
gtgggtgaaggcccagttgaatcgattttagaggcgcgtaaagacggcccctttgtggat
ttattcgatttctgtgcccgcattgatttgaaaaaactcaataagcgcgtgattgaaaag
ctgatctgcgcgggtgccttagacaatcttgggccgcaccgtgcgtcaatgatggccacc
ttgcctgaagcgattcgcgccgccgatcaacatgctaaagccgaagcgattggccaacac
gatatgtttggtttgctcaacagtgaacccgaagacagcaagcagcagtttgttgaatgt
actccttggccggataaaatttggcttgaaggcgagcgcgaaaccttaggcttgtatttg
accggtcatccgatcaatcaatatttgaaagagcttaagcattacacgtccgggcgtttg
aaagatgtgcatcctaccgagcgcggtaaaacagccaaggctgcggggttagtggtggca
acacgcgtgatgttgaccaagcgcggctcgaaaatgggtctgttgacgcttgatgataag
agcgcgcggcttgagatcatgttgtttaccgaagcctttgaaaagtttaatcatctgctg
gaaaaagatcgtatcctcatttgtgaaggtgaggtgagttacgatgattttgccggcggc
aaccgcatgacggcgcgtaacattatcgacatcagtgaggcgcgaagtcactttgctaag
gcgcttgaaatcgatatggatggcagtgagttaacgccatcagccctcgataccttcgag
caagccctaagcccgtggcgtaacggcgccgtgcctgtggtgatcaactacactcaagcc
caagccaaaggtcaatttagactcgccgatgcttggcgagtgaatccgaccgatgacttg
atgctctcgctcgaatcgctactcgggccaaacaaggtgagaattttattctaa
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