Shewanella baltica OS678: Sbal678_1937
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Entry
Sbal678_1937 CDS
T01725
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbt
Shewanella baltica OS678
Pathway
sbt00061
Fatty acid biosynthesis
sbt00071
Fatty acid degradation
sbt01100
Metabolic pathways
sbt01212
Fatty acid metabolism
sbt02024
Quorum sensing
sbt04146
Peroxisome
Module
sbt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sbal678_1937
00071 Fatty acid degradation
Sbal678_1937
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sbal678_1937
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sbal678_1937
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbt01004
]
Sbal678_1937
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbt04147
]
Sbal678_1937
Enzymes [BR:
sbt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sbal678_1937
Lipid biosynthesis proteins [BR:
sbt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sbal678_1937
Exosome [BR:
sbt04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sbal678_1937
Exosomal proteins of breast cancer cells
Sbal678_1937
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
Motif
Other DBs
NCBI-ProteinID:
ADT94098
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All DBs
Position
2267210..2268883
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AA seq
557 aa
AA seq
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MDQPWINHLPKDVPAEINVEQYSSLVDMFETAVAKYEDQPAFINMGATLTYRKLEERSRA
FAAYLQNELKLEKGDRVALMMPNLLQYPIALFGVLRAGMVVVNVNPLYTPRELKHQLIDS
GAKAIVVVSNFARTLEEVVEQTPVESVIITRLGDQLSAPKRTLVNFVVKYIKKLVPKYDL
PHALSMRDTLSTGRRMQYIKPDVTNDDLAFLQYTGGTTGVSKGAMLTHGNIVANVLQADG
AYSPALNDGSEFVVTALPLYHIFALTVNCLLFLHKGSQNLLITNPRDIPGFVAELKKYPF
TALTGVNTLFNALVNSDEFSQLDFSRLKLSIGGGMAVQKAVADKWQAITKTRLLEGYGLT
EASPLLTCCPYNLDGYNGSIGFPAPSTLIQIRDDDGKVLAQGETGELFGKGPQVMKGYWQ
RPEETAKVIDTDGWLATGDIGYMDEKGFFYIVDRKKDMILVSGFNVFPNEVEEVVALHPK
VIEVAAVGVPNDASGELVKVFVVAKDKSLTAEDIIKHCRIHLTGYKVPKLVEFRDELPKT
NVGKILRRELRDEAKRA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggatcagccttggattaatcatttgccaaaagatgtgcctgctgaaattaatgtggag
cagtactcatcgcttgttgatatgttcgaaacagcggtggctaagtatgaagatcaacct
gcatttatcaacatgggtgccacgctaacctaccgtaaattggaagaacgcagccgtgca
ttcgccgcgtatctacaaaatgaattaaagcttgaaaagggcgatcgtgtcgccctgatg
atgccaaacctgctgcaatacccgattgcgctgtttggggtattacgtgccggtatggtg
gtcgttaacgttaacccgctatataccccgcgcgaactcaaacatcagttgattgactcg
ggcgccaaagccatcgttgtagtgtcaaacttcgcccgcaccttagaagaagtggtcgaa
caaacgcccgttgaaagcgtcatcattacccgtttgggtgatcaattaagcgcacccaaa
cgcaccttagtgaactttgtggtgaagtacattaagaagttagtgccaaaatatgattta
ccccacgcattatcaatgcgcgacaccttatcaaccggtcgtcgcatgcaatacattaaa
cctgacgtcactaacgatgacttagcgtttttacaatacacaggtggcaccactggggtg
tctaaaggcgcgatgttgacccatggcaatattgtcgccaacgtattgcaggccgatggc
gcttattcgcccgccttaaacgatggcagtgagtttgtggtaacggctttgccgctgtat
cacatcttcgcgttgaccgtgaattgcctgctgtttttgcacaaaggcagccagaactta
cttatcaccaatcctcgtgatatcccaggatttgttgccgagttgaaaaagtatcctttc
actgcattgactggggtaaacaccttgtttaacgcgttagtgaacagtgatgaattttcc
cagttggatttttcacgcttaaaactctctatcggtggtggcatggcggtacaaaaagcc
gtggcggataaatggcaagctatcactaagacccgtttactcgaaggttatggtctgacc
gaagcctcacctttattaacctgttgcccatataatttagatggttacaacggttcaatt
ggtttccctgcaccttcgacgctcattcaaatccgtgacgatgacggcaaggtattagcc
caaggcgaaaccggtgaactgttcggtaaaggtcctcaggtaatgaaaggctattggcaa
cgtcctgaagaaactgccaaagtgattgataccgacggctggttagccacgggcgatatt
ggttacatggatgagaaagggttcttctatattgtcgatcgtaagaaagacatgatctta
gtttcaggctttaacgtattccccaatgaagtcgaagaagtggtcgcactgcatcctaaa
gtgattgaagtggccgctgttggtgtaccaaacgacgccagtggtgagttagtgaaggta
tttgtggtggcaaaagataaatctttaaccgctgaagacatcattaagcactgccgtatt
catttaacgggatataaagtaccgaagctggtagaatttagggacgagttacctaaaacc
aacgtgggtaaaatcttgcgacgagagcttagagacgaagctaagcgcgcgtaa
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