Shewanella baltica OS678: Sbal678_1970
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Entry
Sbal678_1970 CDS
T01725
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sbt
Shewanella baltica OS678
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbt01002
]
Sbal678_1970
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbt01011
]
Sbal678_1970
Peptidases and inhibitors [BR:
sbt01002
]
Cysteine peptidases
Family C82
Sbal678_1970
Peptidoglycan biosynthesis and degradation proteins [BR:
sbt01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Sbal678_1970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ADT94131
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Position
2305431..2306996
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AA seq
521 aa
AA seq
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MVLHKIIQYFSSFVRASQIKRMPMSRCLGLLVLSVIVCFPIRSVAMATDDTQAISSNPSI
GAQQDMLQLNSVQPSTESKVDEPDAVLPLTALVPQVLLLDLAGVNPIFGLHYRELTLSPN
TLSAADVARVQADVAGYWRYIKTFAQCNNGAPVDTVSTVIPTDAQYQRVLKQVTHLVQLD
ATEPWETLVLDEKLTVGMSHPLLDTIAKRLWLLGDLAIEPMTNLVYSEELVVGVKRFQHR
HGLKQDGVIGKQTLYWLNQSPKARAVLLAKNTIRQRVFERKLEPSYLLINVPAFEMILVD
NGTTVLNSKVIVGKSSRQTPLLDSQISSVVLNPSWRVPSSILRRDILPQIRRNGHYLNER
QFDVYDYNGQLVQHMPEEWQGLASTSFPYQLVQRPGAKNALGKYKFHFDNSFSVYLHGTS
EPSLFNKDDRALSSGCIRIEKVTELAQWFKEHLVKDKRLWDKLAPDVTEPQWFSLSQKLP
VHLVYWTAWLDDSGQEQYRSDIYHLEAELTNAVPATVLDLN
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggtattgcacaagatcatccagtatttctcatcgtttgtacgcgcatcgcaaattaaa
cgtatgcccatgagtcgctgtttgggactgttagtgctgagcgttattgtctgttttcct
atcaggtcagtggcaatggctaccgatgatactcaagccatttcatcgaatcccagcatt
ggggcacagcaagacatgctgcagctaaacagtgtgcaaccaagcactgagagtaaagtc
gatgagcccgatgcagtcttgccacttacggcattagtgccgcaggtgttgctactggat
cttgcgggcgttaatcctatttttggtctgcattatcgcgaattaacattatcaccaaat
accttatcagcggccgatgtggcgcgggttcaagctgatgtggcgggctactggcgttat
atcaagacctttgcgcagtgtaataacggcgctcccgtagacacagtatcaaccgttatt
ccaaccgatgcccaatatcaaagggtgctaaaacaagtcacccatttagtgcaattggat
gccactgaaccttgggaaaccttagtgctggatgaaaagttaacggtcggaatgagtcat
ccactccttgataccatagccaaacgcttgtggctcttgggtgatttagccattgagcca
atgacgaaccttgtctatagcgaagaattggtggtcggtgttaagcgtttccaacatagg
catgggttaaaacaagacggggtgattggcaagcagaccttgtattggctgaatcaatcg
ccaaaggcgagggcagtcttattagctaaaaatactattcggcaacgagtgtttgaacgt
aagttggagccaagctacttgctgattaacgtgcccgcctttgagatgatcttagtcgat
aatggcaccacagtgctcaattccaaagtgattgtgggcaaatcttctcggcaaaccccg
ctgctggatagccagatttccagcgtggtcctcaatcccagttggcgagtgccgagcagc
attctacgccgagatatcctgccgcagattcggcgaaatggtcattatcttaatgaacgc
caatttgatgtgtacgactataacggccaactagtgcaacacatgccagaagaatggcag
ggcttagccagcacttcgtttccctatcagctagtgcaacgcccaggtgcgaagaatgca
ttaggcaaatataagttccactttgataacagtttcagtgtctatttacatggcacttct
gagccaagtctctttaataaggacgatagggcactatcatcaggctgtattcggattgaa
aaagtcactgaattagcccagtggtttaaagaacatttagttaaagataagcgtttatgg
gacaaattagccccagatgtaacggagccccagtggttttcactttctcaaaagctgcca
gtgcatctggtgtattggactgcatggctggatgacagtgggcaagagcaataccgtagc
gacatttaccatttagaagctgagttgacaaatgccgtacctgccacggttttagatctc
aattaa
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