Shewanella baltica OS678: Sbal678_2095
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Entry
Sbal678_2095 CDS
T01725
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sbt
Shewanella baltica OS678
Pathway
sbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sbal678_2095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbt03400
]
Sbal678_2095
Enzymes [BR:
sbt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Sbal678_2095
DNA repair and recombination proteins [BR:
sbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sbal678_2095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Viral_helicase1
UvrD_C_2
AAA_11
SH3_13
Helicase_RecD
UvrD-helicase
AAA_22
SLFN-g3_helicase
TraI_hel_assoc_N
AAA_28
DEAD
nSTAND3
PhoH
ResIII
SRP54
UvrD_C
PIF1
AAA_16
NTPase_1
TrwB_AAD_bind
Flavi_DEAD
Mg_chelatase
T2SSE
NACHT
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
ADT94252
LinkDB
All DBs
Position
complement(2452552..2454774)
Genome browser
AA seq
740 aa
AA seq
DB search
MMRSTQGLNAHSLTAAKWIDHGAIQLSAPLPELLKQWEQERLLTPLDRHFALEMSHLHPS
DSQHPLFILLCALLSQQLSSQHSCLVLAHIVPLNPMAEQSSHCKISLSLEALTETLQTFD
AVGQAGSNKPLIFDNGRLYLQRYHQFETSVAASLIRLSGSVSKHFSEEVNHQEQTQTAKL
RSLLDQLFPATVSDPHSLTTNVLTTSVITKSDSTQSTAPIDWQKVATATALGKKLAVITG
GPGTGKTTTVTKLLLLLQMESQQEIRLVAPTGKAAARLSESIKASKARLAKELSAHTDVV
DEARNRNNQDFLTALGRIPEEASTLHRLLGVIPNSPHFRHHQGNPLRLDLLIVDEASMVD
LPMMYKLLSALPEHASLILLGDQDQLASVEAGAVLADICAGLKMPVEPNNLAQNNTASNN
SALWQMRYSKEQAERLSALTGFELTPYISDAPKLGDSLCMLMHSHRFKGDAGIGQLASAV
NRADLQGILQVWQQGPAELSWLEHSMALSQTQAKVSEPANNMGLNLLLEQACQQYGIYLS
ALNSDENHSDLSKRPSTAEIIESFNQYRILCAMRSGDYGVEGINQYVTQALANAKLIKPL
QEFYLGRPIIIQSNDYNLGLFNGDIGLILQDEDKPERLMAHFIKADGSLLKVLPARLPSH
ETCYAMTVHKSQGSEFSRVALVLPPNPSLAQWQLLTKELVYTAITRAKVHFTCLGTQHVF
ERASSQATQRASGLADRLWG
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgctcaacccaagggctaaatgcacattcactcacagccgcgaaatggatagat
catggcgcaattcagcttagcgcgccgctgccagagctgttaaaacagtgggagcaagaa
cgattgctcacaccgctcgatcggcatttcgcactcgagatgagccacttgcatccaagt
gacagccaacatcccttgtttattttgctgtgtgcgctattaagccagcaattatcttca
cagcacagttgcctagtgctcgcccatatcgtgccgcttaatcctatggccgagcaaagt
agccattgtaaaatcagcttaagcctagaagcactcaccgagaccttgcaaacctttgat
gcagtcggtcaagcgggcagtaacaaaccacttatttttgataatggcagactctatttg
cagcgttatcatcaatttgaaacctcagtggccgcttcgttaatccgcttatcaggtagc
gtatctaaacacttctctgaagaggtaaaccatcaagagcaaactcaaacagctaagttg
cggtcactactagatcaactgttccccgccactgtcagcgatccccattcactcactacc
aatgtactcactaccagtgtaatcactaaaagtgatagcacacaaagcacagcacccatt
gattggcaaaaggttgccacggccactgcgctgggtaaaaaactggcggtgatcactggt
ggcccaggtacgggcaaaaccaccactgtgactaagcttttgttattgctacaaatggaa
tcacagcaggaaattcgtttagtcgcgccaacgggaaaagcggcggctcggttaagcgaa
tcaatcaaagcctcaaaagcgcgtctggcgaaggaactcagcgcccatactgatgttgtt
gatgaagctcgcaatagaaataatcaagactttttaacggcactggggcgcattccagag
gaagcatcaaccttacacagactgcttggagtgatccccaattcgccgcactttcgccac
catcaaggtaatccgcttaggctcgacttattaatcgtcgacgaagcctctatggtcgat
ttgcccatgatgtataagctgctgagcgcactgcctgagcacgccagtttgattttactc
ggcgatcaggatcaactcgcctcggttgaagccggcgctgtgctcgccgatatttgtgcg
ggcctgaaaatgccagtagaacccaataaccttgcgcaaaataacacagcatccaacaac
tctgctctgtggcaaatgcgctattccaaggagcaagccgagcgtctgagtgcgttaacg
gggtttgagttaacaccctatatcagcgacgcgcctaaacttggcgatagcttgtgtatg
ctaatgcacagccacagatttaaaggcgatgcagggattggacaacttgcgagcgccgtt
aatcgcgcggatcttcaaggtattttgcaagtatggcaacagggacccgcagaattaagc
tggttagaacacagcatggctttaagccaaacccaagccaaagtgagcgagcctgctaat
aatatgggactcaatttactgctagagcaagcctgccagcaatatggtatttatctcagc
gccttgaatagcgatgaaaatcatagtgatttaagtaagcgtccaagcacagctgagatc
atagaaagctttaaccagtaccgcattttatgcgctatgcgctcgggcgattatggggtt
gaaggcatcaatcagtatgtaactcaagcactggccaatgccaagctgattaaaccgcta
caggagttttatctgggtcggccgattatcatccaaagcaatgactataacttaggcctg
tttaacggtgatatcggattgattttgcaggatgaagataaacccgaacgcttaatggcg
cactttatcaaggccgatggcagtctgttaaaagtcttgccagcacgtttacccagccat
gaaacctgttacgccatgacggtacacaaaagccaaggcagtgagttcagtcgggtggcc
ttagtgctgccacctaaccccagcttagcgcagtggcaactgctaaccaaagagttggtc
tataccgccatcacccgcgctaaagtgcattttacctgcttaggcacccagcacgtattc
gagcgggccagtagccaagcaacccaacgcgcatcgggtcttgcagacaggctttggggt
taa
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